RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 C16orf86Q6ZW13 317 aa19.67■□□□□ 0.74
SCLT1-205ENST00000503401 RAD50Q92878 1312 aa19.67■□□□□ 0.74
SCLT1-205ENST00000503401 IRF6O14896 467 aa19.66■□□□□ 0.74
SCLT1-205ENST00000503401 SGSM2O43147 1006 aa19.66■□□□□ 0.74
SCLT1-205ENST00000503401 PPARAQ07869 468 aa19.66■□□□□ 0.74
SCLT1-205ENST00000503401 ALX1Q15699 326 aa19.66■□□□□ 0.74
SCLT1-205ENST00000503401 ZHX2Q9Y6X8 837 aa19.66■□□□□ 0.74
SCLT1-205ENST00000503401 GH2P01242 217 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 ZBTB48P10074 688 aaPredicted RBP19.65■□□□□ 0.74
SCLT1-205ENST00000503401 HAND2P61296 217 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 CTDSPL2Q05D32 466 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 SWAP70Q9UH65 585 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 ZBTB21Q9ULJ3 1066 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 ROBO3Q96MS0 1386 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 CDC45O75419 566 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 PRDM1O75626 825 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 MAP2K2P36507 400 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 PTH1RQ03431 593 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 PPATQ06203 517 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 ESYT1Q9BSJ8 1104 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 INCENPQ9NQS7 918 aa19.65■□□□□ 0.74
SCLT1-205ENST00000503401 MPHOSPH10O00566 681 aaKnown RBP19.64■□□□□ 0.73
SCLT1-205ENST00000503401 ASNSP08243 561 aa19.64■□□□□ 0.73
SCLT1-205ENST00000503401 AKR1B1P15121 316 aa19.64■□□□□ 0.73
SCLT1-205ENST00000503401 PPIL2Q13356 520 aa19.64■□□□□ 0.73
SCLT1-205ENST00000503401 ABCB5Q2M3G0 1257 aa19.64■□□□□ 0.73
SCLT1-205ENST00000503401 DSCC1Q9BVC3 393 aa19.64■□□□□ 0.73
SCLT1-205ENST00000503401 PTPRFP10586 1907 aa19.64■□□□□ 0.73
SCLT1-205ENST00000503401 RAB3GAP1Q15042 981 aa19.63■□□□□ 0.73
SCLT1-205ENST00000503401 JMYQ8N9B5 988 aa19.63■□□□□ 0.73
SCLT1-205ENST00000503401 MKNK2Q9HBH9 465 aa19.63■□□□□ 0.73
SCLT1-205ENST00000503401 TACC3Q9Y6A5 838 aa19.63■□□□□ 0.73
SCLT1-205ENST00000503401 LAMA4Q16363 1823 aa19.63■□□□□ 0.73
SCLT1-205ENST00000503401 TRIM75PA6NK02 468 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 MS4A4AQ96JQ5 239 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 AFG3L2Q9Y4W6 797 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 ZMYM6O95789 1325 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 USP17L5A8MUK1 530 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 RASA1P20936 1047 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 GUCY1A2P33402 732 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 NBPF3Q9H094 633 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 CABP5Q9NP86 173 aa19.62■□□□□ 0.73
SCLT1-205ENST00000503401 SLC3A2P08195 630 aaKnown RBP19.61■□□□□ 0.73
SCLT1-205ENST00000503401 SPP2Q13103 211 aa19.61■□□□□ 0.73
SCLT1-205ENST00000503401 SEPT2Q15019 361 aa19.61■□□□□ 0.73
SCLT1-205ENST00000503401 CASC1Q6TDU7 716 aa19.61■□□□□ 0.73
SCLT1-205ENST00000503401 CLEC10AQ8IUN9 316 aa19.61■□□□□ 0.73
SCLT1-205ENST00000503401 ANAPC4Q9UJX5 808 aa19.61■□□□□ 0.73
SCLT1-205ENST00000503401 CCL15-CCL14A0A0B4J2E2 113 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 MANSC4A6NHS7 340 aaPredicted RBP19.6■□□□□ 0.73
SCLT1-205ENST00000503401 GTF2A2P52657 109 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 PDE4BQ07343 736 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 SNAPC2Q13487 334 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 DGKZQ13574 1117 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 CCL15Q16663 113 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 BRI3BPQ8WY22 251 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 KCNH4Q9UQ05 1017 aa19.6■□□□□ 0.73
SCLT1-205ENST00000503401 SREBF2Q12772 1141 aa19.59■□□□□ 0.73
SCLT1-205ENST00000503401 TBC1D10CQ8IV04 446 aa19.59■□□□□ 0.73
SCLT1-205ENST00000503401 ZNF280CQ8ND82 737 aa19.59■□□□□ 0.73
SCLT1-205ENST00000503401 PTPN18Q99952 460 aa19.59■□□□□ 0.73
SCLT1-205ENST00000503401 ANO2Q9NQ90 1003 aa19.59■□□□□ 0.73
SCLT1-205ENST00000503401 TAOK2Q9UL54 1235 aa19.59■□□□□ 0.73
SCLT1-205ENST00000503401 IGF2BP3O00425 579 aaKnown RBP eCLIP19.58■□□□□ 0.73
SCLT1-205ENST00000503401 ZNF213O14771 459 aa19.58■□□□□ 0.73
SCLT1-205ENST00000503401 TM4SF4P48230 202 aa19.58■□□□□ 0.73
SCLT1-205ENST00000503401 FAM47AQ5JRC9 791 aa19.58■□□□□ 0.73
SCLT1-205ENST00000503401 KIAA1211Q6ZU35 1233 aa19.58■□□□□ 0.73
SCLT1-205ENST00000503401 TMEM179Q6ZVK1 233 aa19.58■□□□□ 0.73
SCLT1-205ENST00000503401 ZNF444Q8N0Y2 327 aaPredicted RBP19.58■□□□□ 0.73
SCLT1-205ENST00000503401 CCDC17Q96LX7 622 aa19.58■□□□□ 0.73
SCLT1-205ENST00000503401 LSG1Q9H089 658 aaKnown RBP19.58■□□□□ 0.73
SCLT1-205ENST00000503401 GINM1Q9NU53 330 aa19.58■□□□□ 0.73
SCLT1-205ENST00000503401 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.58■□□□□ 0.73
SCLT1-205ENST00000503401 GREB1LQ9C091 1923 aaPredicted RBP19.58■□□□□ 0.73
SCLT1-205ENST00000503401 MAP2K1Q02750 393 aaPredicted RBP19.58■□□□□ 0.72
SCLT1-205ENST00000503401 MTMR2Q13614 643 aa19.58■□□□□ 0.72
SCLT1-205ENST00000503401 RRP12Q5JTH9 1297 aaKnown RBP19.58■□□□□ 0.72
SCLT1-205ENST00000503401 ACER1Q8TDN7 264 aa19.58■□□□□ 0.72
SCLT1-205ENST00000503401 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.58■□□□□ 0.72
SCLT1-205ENST00000503401 AS3MTQ9HBK9 375 aa19.58■□□□□ 0.72
SCLT1-205ENST00000503401 ZNF287Q9HBT7 754 aa19.58■□□□□ 0.72
SCLT1-205ENST00000503401 TOMM22Q9NS69 142 aa19.58■□□□□ 0.72
SCLT1-205ENST00000503401 WBP1LQ9NX94 342 aa19.58■□□□□ 0.72
SCLT1-205ENST00000503401 CTNNA3Q9UI47 895 aa19.58■□□□□ 0.72
SCLT1-205ENST00000503401 A0A0G2JLL6 359 aaPredicted RBP19.57■□□□□ 0.72
SCLT1-205ENST00000503401 CXCL11O14625 94 aa19.57■□□□□ 0.72
SCLT1-205ENST00000503401 CETPP11597 493 aa19.57■□□□□ 0.72
SCLT1-205ENST00000503401 MOGSQ13724 837 aa19.57■□□□□ 0.72
SCLT1-205ENST00000503401 IMMTQ16891 758 aaKnown RBP19.57■□□□□ 0.72
SCLT1-205ENST00000503401 PRRT2Q7Z6L0 340 aaPredicted RBP19.57■□□□□ 0.72
SCLT1-205ENST00000503401 IFNL1Q8IU54 200 aa19.57■□□□□ 0.72
SCLT1-205ENST00000503401 NKX2-3Q8TAU0 364 aa19.57■□□□□ 0.72
SCLT1-205ENST00000503401 MAP4K1Q92918 833 aa19.57■□□□□ 0.72
SCLT1-205ENST00000503401 WDR18Q9BV38 432 aa19.57■□□□□ 0.72
SCLT1-205ENST00000503401 RBM8AQ9Y5S9 174 aaKnown RBP19.57■□□□□ 0.72
SCLT1-205ENST00000503401 TESPA1A2RU30 521 aaPredicted RBP19.56■□□□□ 0.72
SCLT1-205ENST00000503401 RANBP6O60518 1105 aaKnown RBP19.56■□□□□ 0.72
SCLT1-205ENST00000503401 HMGCS2P54868 508 aa19.56■□□□□ 0.72
SCLT1-205ENST00000503401 ZYXQ15942 572 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms