RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 CICQ96RK0 1608 aaPredicted RBP9.16□□□□□ -0.94
PTCD2-206ENST00000503315 TJP1Q07157 1748 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 KIAA1551Q9HCM1 1747 aa9.16□□□□□ -0.94
PTCD2-206ENST00000503315 BRCA1P38398 1863 aaKnown RBP9.16□□□□□ -0.94
PTCD2-206ENST00000503315 ADAMTS7Q9UKP4 1686 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 RPS6KA4O75676 772 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 C1orf53Q5VUE5 145 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 STAG1Q8WVM7 1258 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 TMEM74Q96NL1 305 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 FEZ1Q99689 392 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 ESYT1Q9BSJ8 1104 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 NT5C1AQ9BXI3 368 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 LGR6Q9HBX8 967 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 TCEAL9Q9UHQ7 104 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 USP3Q9Y6I4 520 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 CNTNAP4Q9C0A0 1308 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 NPC1L1Q9UHC9 1359 aa9.15□□□□□ -0.94
PTCD2-206ENST00000503315 HMGB1P1B2RPK0 211 aaPredicted RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 PRC1O43663 620 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 DIAPH1O60610 1272 aaKnown RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 MICAL2O94851 1124 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 IL2RAP01589 272 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 HMOX1P09601 288 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 PDE12Q6L8Q7 609 aaKnown RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 XKR5Q6UX68 686 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 C16orf86Q6ZW13 317 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 ZNF296Q8WUU4 475 aaPredicted RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 DNAJC7Q99615 494 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 SLC52A2Q9HAB3 445 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 SUPT16HQ9Y5B9 1047 aaKnown RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 ESYT3A0FGR9 886 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 MMP10P09238 476 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 MTHFSDQ2M296 383 aaKnown RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 NBPF10Q6P3W6 841 aaKnown RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 KIAA0907Q7Z7F0 614 aaPredicted RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 ZDHHC1Q8WTX9 485 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 EAF1Q96JC9 268 aaPredicted RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 NIFKQ9BYG3 293 aaKnown RBP9.14□□□□□ -0.95
PTCD2-206ENST00000503315 HOMER2Q9NSB8 354 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
PTCD2-206ENST00000503315 RNMTO43148 476 aaKnown RBP9.13□□□□□ -0.95
PTCD2-206ENST00000503315 SIPA1L3O60292 1781 aaPredicted RBP9.13□□□□□ -0.95
PTCD2-206ENST00000503315 LILRA1O75019 489 aa9.13□□□□□ -0.95
PTCD2-206ENST00000503315 GYS1P13807 737 aa9.13□□□□□ -0.95
PTCD2-206ENST00000503315 RFC4P35249 363 aa9.13□□□□□ -0.95
PTCD2-206ENST00000503315 CRKLP46109 303 aaKnown RBP9.13□□□□□ -0.95
PTCD2-206ENST00000503315 UBR2Q8IWV8 1755 aa9.13□□□□□ -0.95
PTCD2-206ENST00000503315 SUV39H2Q9H5I1 410 aa9.13□□□□□ -0.95
PTCD2-206ENST00000503315 PRDM16Q9HAZ2 1276 aa9.13□□□□□ -0.95
PTCD2-206ENST00000503315 PARP3Q9Y6F1 533 aa9.13□□□□□ -0.95
PTCD2-206ENST00000503315 COL3A1P02461 1466 aaPredicted RBP9.12□□□□□ -0.95
PTCD2-206ENST00000503315 MRC1P22897 1456 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 POTECB2RU33 542 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 TBX4P57082 545 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 TGFB2P61812 414 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 PPP1R26Q5T8A7 1209 aaPredicted RBP9.12□□□□□ -0.95
PTCD2-206ENST00000503315 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
PTCD2-206ENST00000503315 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 EHBP1Q8NDI1 1231 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 UBE2Q2Q8WVN8 375 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
PTCD2-206ENST00000503315 TMEM260Q9NX78 707 aa9.12□□□□□ -0.95
PTCD2-206ENST00000503315 AFDNP55196 1824 aaKnown RBP9.11□□□□□ -0.95
PTCD2-206ENST00000503315 ARFGEF1Q9Y6D6 1849 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 TGFBR3LH3BV60 316 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 HRO43593 1189 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 S1PR4O95977 384 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 C1QTNF8P60827 252 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 SLC39A6Q13433 755 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 PCNX4Q63HM2 1172 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 TMED8Q6PL24 325 aaPredicted RBP9.11□□□□□ -0.95
PTCD2-206ENST00000503315 PMM1Q92871 262 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 MTRQ99707 1265 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 PRR12Q9ULL5 1215 aa9.11□□□□□ -0.95
PTCD2-206ENST00000503315 SMAD7O15105 426 aaKnown RBP9.1□□□□□ -0.95
PTCD2-206ENST00000503315 PDPK1O15530 556 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 HCLS1P14317 486 aaPredicted RBP9.1□□□□□ -0.95
PTCD2-206ENST00000503315 MASP1P48740 699 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 CNGB1Q14028 1251 aaPredicted RBP9.1□□□□□ -0.95
PTCD2-206ENST00000503315 DNAJC10Q8IXB1 793 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 LILRB2Q8N423 598 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 RHPN1Q8TCX5 695 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 NLRP3Q96P20 1036 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 CDK15Q96Q40 435 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 SPOCK3Q9BQ16 436 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 MSRB2Q9Y3D2 182 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 KCPQ6ZWJ8 1503 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 SBF1O95248 1867 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 PXDNLA1KZ92 1463 aa9.1□□□□□ -0.95
PTCD2-206ENST00000503315 USP42Q9H9J4 1324 aaKnown RBP9.09□□□□□ -0.95
PTCD2-206ENST00000503315 A0A0G2JLW4 131 aa9.09□□□□□ -0.95
PTCD2-206ENST00000503315 F6X3S4 739 aa9.09□□□□□ -0.95
PTCD2-206ENST00000503315 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
PTCD2-206ENST00000503315 KCNA3P22001 575 aa9.09□□□□□ -0.95
PTCD2-206ENST00000503315 CNGA1P29973 690 aa9.09□□□□□ -0.95
PTCD2-206ENST00000503315 TM4SF1P30408 202 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms