RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 PNMA6EA0A0J9YXQ4 647 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 MAPK4P31152 587 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 HERVK_113P62684 666 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 G3BP1Q13283 466 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDR1-247ENST00000502955 LRIT3Q3SXY7 679 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
DDR1-247ENST00000502955 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 GTF3C2Q8WUA4 911 aaPredicted RBP16.87■□□□□ 0.29
DDR1-247ENST00000502955 P2RX7Q99572 595 aaKnown RBP16.87■□□□□ 0.29
DDR1-247ENST00000502955 NUDT12Q9BQG2 462 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 AATFQ9NY61 560 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDR1-247ENST00000502955 FLT1P17948 1338 aa16.87■□□□□ 0.29
DDR1-247ENST00000502955 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
DDR1-247ENST00000502955 PRKAR2AP13861 404 aaKnown RBP16.86■□□□□ 0.29
DDR1-247ENST00000502955 JAG1P78504 1218 aa16.86■□□□□ 0.29
DDR1-247ENST00000502955 USP6NLQ92738 828 aa16.86■□□□□ 0.29
DDR1-247ENST00000502955 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
DDR1-247ENST00000502955 DNAH12Q6ZR08 3092 aa16.85■□□□□ 0.29
DDR1-247ENST00000502955 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
DDR1-247ENST00000502955 COL6A1P12109 1028 aa16.85■□□□□ 0.29
DDR1-247ENST00000502955 TRIM27P14373 513 aa16.85■□□□□ 0.29
DDR1-247ENST00000502955 CYP2B6P20813 491 aa16.85■□□□□ 0.29
DDR1-247ENST00000502955 TGFBRAP1Q8WUH2 860 aa16.85■□□□□ 0.29
DDR1-247ENST00000502955 ZNF512BQ96KM6 892 aaPredicted RBP16.85■□□□□ 0.29
DDR1-247ENST00000502955 ZMYND8Q9ULU4 1186 aaPredicted RBP16.85■□□□□ 0.29
DDR1-247ENST00000502955 PFASO15067 1338 aa16.85■□□□□ 0.29
DDR1-247ENST00000502955 DLL1O00548 723 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 CYP2E1P05181 493 aaPredicted RBP16.84■□□□□ 0.29
DDR1-247ENST00000502955 MAGEA10P43363 369 aaPredicted RBP16.84■□□□□ 0.29
DDR1-247ENST00000502955 ERVK-9P63128 1117 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 ERVK-24P63145 666 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 PDE3AQ14432 1141 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 CCDC158Q5M9N0 1113 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 MORN1Q5T089 497 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 ADGRA1Q86SQ6 560 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 TDHQ8IZJ6 230 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 ZBTB21Q9ULJ3 1066 aa16.84■□□□□ 0.29
DDR1-247ENST00000502955 UNC80Q8N2C7 3258 aa16.83■□□□□ 0.29
DDR1-247ENST00000502955 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
DDR1-247ENST00000502955 LAMA2P24043 3122 aaKnown RBP16.83■□□□□ 0.28
DDR1-247ENST00000502955 CACNB2Q08289 660 aaPredicted RBP16.83■□□□□ 0.28
DDR1-247ENST00000502955 POLA2Q14181 598 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 Q3C1V9 767 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 TNNI3KQ59H18 835 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 TTC39AQ5SRH9 613 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 LHX8Q68G74 356 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 CRACR2BQ8N4Y2 399 aaPredicted RBP16.83■□□□□ 0.28
DDR1-247ENST00000502955 TRIM34Q9BYJ4 488 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 EMILIN3Q9NT22 766 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 PALD1Q9ULE6 856 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.28
DDR1-247ENST00000502955 FPGT-TNNI3KV9GXZ4 949 aa16.83■□□□□ 0.28
DDR1-247ENST00000502955 PEX10O60683 326 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 GDF11O95390 407 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 SYN1P17600 705 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 RGS2P41220 211 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 SHROOM1Q2M3G4 852 aaPredicted RBP16.82■□□□□ 0.28
DDR1-247ENST00000502955 POTEEQ6S8J3 1075 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 GPR142Q7Z601 462 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 C12orf42Q96LP6 360 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 APBA2Q99767 749 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 PORCNQ9H237 461 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 SNRKQ9NRH2 765 aa16.82■□□□□ 0.28
DDR1-247ENST00000502955 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 TATDN1Q6P1N9 297 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 PLEKHH3Q7Z736 793 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 CERS3Q8IU89 383 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 DEFB123Q8N688 67 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 SSH3Q8TE77 659 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 DBNDD2Q9BQY9 259 aa16.81■□□□□ 0.28
DDR1-247ENST00000502955 MYH1P12882 1939 aa16.8■□□□□ 0.28
DDR1-247ENST00000502955 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
DDR1-247ENST00000502955 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
DDR1-247ENST00000502955 TNNQ9UQP3 1299 aa16.8■□□□□ 0.28
DDR1-247ENST00000502955 RABGAP1Q9Y3P9 1069 aa16.8■□□□□ 0.28
DDR1-247ENST00000502955 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
DDR1-247ENST00000502955 CCND3P30281 292 aaPredicted RBP16.79■□□□□ 0.28
DDR1-247ENST00000502955 ZAP70P43403 619 aa16.79■□□□□ 0.28
DDR1-247ENST00000502955 MAP2K5Q13163 448 aa16.79■□□□□ 0.28
DDR1-247ENST00000502955 CCL14Q16627 93 aa16.79■□□□□ 0.28
DDR1-247ENST00000502955 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
DDR1-247ENST00000502955 LBX2Q6XYB7 198 aa16.79■□□□□ 0.28
DDR1-247ENST00000502955 PAGR1Q9BTK6 254 aa16.79■□□□□ 0.28
DDR1-247ENST00000502955 UBE2OQ9C0C9 1292 aaKnown RBP16.79■□□□□ 0.28
DDR1-247ENST00000502955 EHD4Q9H223 541 aa16.79■□□□□ 0.28
DDR1-247ENST00000502955 STXBP5LQ9Y2K9 1186 aa16.79■□□□□ 0.28
DDR1-247ENST00000502955 USP17L15C9J2P7 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 USP17L13C9JLJ4 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 USP17L11C9JVI0 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 USP17L18D6R9N7 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 USP17L22D6RA61 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 USP17L17D6RBQ6 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 USP17L19D6RCP7 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 USP17L20D6RJB6 530 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 BCAR3O75815 825 aa16.78■□□□□ 0.28
DDR1-247ENST00000502955 CNMDO75829 334 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms