RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 MORN1Q5T089 497 aa22.29■■□□□ 1.16
HERC6-204ENST00000502870 MFSD14CQ5VZR4 134 aa22.29■■□□□ 1.16
HERC6-204ENST00000502870 CDX2Q99626 313 aaPredicted RBP22.29■■□□□ 1.16
HERC6-204ENST00000502870 DHX36Q9H2U1 1008 aaKnown RBP22.29■■□□□ 1.16
HERC6-204ENST00000502870 TXNRD2Q9NNW7 524 aa22.29■■□□□ 1.16
HERC6-204ENST00000502870 PI4KBQ9UBF8 816 aa22.29■■□□□ 1.16
HERC6-204ENST00000502870 NOL10Q9BSC4 688 aaKnown RBP22.28■■□□□ 1.16
HERC6-204ENST00000502870 GINM1Q9NU53 330 aa22.28■■□□□ 1.16
HERC6-204ENST00000502870 AKAP2Q9Y2D5 859 aa22.28■■□□□ 1.16
HERC6-204ENST00000502870 USP17L10C9JJH3 530 aa22.27■■□□□ 1.16
HERC6-204ENST00000502870 CCNA1P78396 465 aa22.27■■□□□ 1.16
HERC6-204ENST00000502870 CCL14Q16627 93 aa22.27■■□□□ 1.16
HERC6-204ENST00000502870 PAGR1Q9BTK6 254 aa22.27■■□□□ 1.16
HERC6-204ENST00000502870 TRIM34Q9BYJ4 488 aa22.27■■□□□ 1.16
HERC6-204ENST00000502870 RBPJLQ9UBG7 517 aa22.27■■□□□ 1.16
HERC6-204ENST00000502870 MAP2K5Q13163 448 aa22.26■■□□□ 1.15
HERC6-204ENST00000502870 RRP1BQ14684 758 aaKnown RBP22.26■■□□□ 1.15
HERC6-204ENST00000502870 TEX11Q8IYF3 940 aa22.26■■□□□ 1.15
HERC6-204ENST00000502870 PORCNQ9H237 461 aa22.26■■□□□ 1.15
HERC6-204ENST00000502870 EYSQ5T1H1 3165 aa22.26■■□□□ 1.15
HERC6-204ENST00000502870 PRUNE2Q8WUY3 3088 aa22.25■■□□□ 1.15
HERC6-204ENST00000502870 DNM1LO00429 736 aa22.25■■□□□ 1.15
HERC6-204ENST00000502870 LPAR1Q92633 364 aa22.25■■□□□ 1.15
HERC6-204ENST00000502870 NSUN4Q96CB9 384 aaKnown RBP22.25■■□□□ 1.15
HERC6-204ENST00000502870 EDC3Q96F86 508 aaKnown RBP22.25■■□□□ 1.15
HERC6-204ENST00000502870 SEMA6BQ9H3T3 888 aa22.25■■□□□ 1.15
HERC6-204ENST00000502870 COPRSQ9NQ92 184 aa22.25■■□□□ 1.15
HERC6-204ENST00000502870 RAI14Q9P0K7 980 aa22.25■■□□□ 1.15
HERC6-204ENST00000502870 DDX20Q9UHI6 824 aaKnown RBP22.25■■□□□ 1.15
HERC6-204ENST00000502870 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
HERC6-204ENST00000502870 PEX10O60683 326 aa22.24■■□□□ 1.15
HERC6-204ENST00000502870 ATN1P54259 1190 aaPredicted RBP22.24■■□□□ 1.15
HERC6-204ENST00000502870 TIMM10P62072 90 aa22.24■■□□□ 1.15
HERC6-204ENST00000502870 XAGE2Q96GT9 111 aa22.24■■□□□ 1.15
HERC6-204ENST00000502870 SIPA1L1O43166 1804 aa22.24■■□□□ 1.15
HERC6-204ENST00000502870 CNGA1P29973 690 aa22.23■■□□□ 1.15
HERC6-204ENST00000502870 RTP1P59025 263 aa22.23■■□□□ 1.15
HERC6-204ENST00000502870 SMAD3P84022 425 aaKnown RBP22.23■■□□□ 1.15
HERC6-204ENST00000502870 Q3C1V9 767 aa22.23■■□□□ 1.15
HERC6-204ENST00000502870 CRACR2BQ8N4Y2 399 aaPredicted RBP22.23■■□□□ 1.15
HERC6-204ENST00000502870 ZNF384Q8TF68 577 aa22.23■■□□□ 1.15
HERC6-204ENST00000502870 PA2G4Q9UQ80 394 aaKnown RBP22.23■■□□□ 1.15
HERC6-204ENST00000502870 RABGAP1Q9Y3P9 1069 aa22.23■■□□□ 1.15
HERC6-204ENST00000502870 IVNS1ABPQ9Y6Y0 642 aa22.23■■□□□ 1.15
HERC6-204ENST00000502870 RLFQ13129 1914 aa22.23■■□□□ 1.15
HERC6-204ENST00000502870 SPTBN5Q9NRC6 3674 aaKnown RBP22.22■■□□□ 1.15
HERC6-204ENST00000502870 FOSL2P15408 326 aa22.22■■□□□ 1.15
HERC6-204ENST00000502870 PLCG2P16885 1265 aa22.22■■□□□ 1.15
HERC6-204ENST00000502870 USP17L2Q6R6M4 530 aa22.22■■□□□ 1.15
HERC6-204ENST00000502870 SPATA5Q8NB90 893 aa22.22■■□□□ 1.15
HERC6-204ENST00000502870 SSH1Q8WYL5 1049 aa22.22■■□□□ 1.15
HERC6-204ENST00000502870 ATP11BQ9Y2G3 1177 aa22.22■■□□□ 1.15
HERC6-204ENST00000502870 SLC15A5A6NIM6 579 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 BAG3O95817 575 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 ATP2B2Q01814 1243 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 SHHQ15465 462 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 GORABQ5T7V8 394 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 WDR78Q5VTH9 848 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 FOXP4Q8IVH2 680 aaPredicted RBP22.21■■□□□ 1.15
HERC6-204ENST00000502870 ARRDC4Q8NCT1 418 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 HMG20BQ9P0W2 317 aa22.21■■□□□ 1.15
HERC6-204ENST00000502870 FOCADQ5VW36 1801 aa22.2■■□□□ 1.14
HERC6-204ENST00000502870 MYLIPQ8WY64 445 aa22.2■■□□□ 1.14
HERC6-204ENST00000502870 ZBTB21Q9ULJ3 1066 aa22.2■■□□□ 1.14
HERC6-204ENST00000502870 CDK5RAP2Q96SN8 1893 aa22.2■■□□□ 1.14
HERC6-204ENST00000502870 TMEM265A0A087WTH1 108 aa22.19■■□□□ 1.14
HERC6-204ENST00000502870 KBTBD13C9JR72 458 aa22.19■■□□□ 1.14
HERC6-204ENST00000502870 ATF7IPQ6VMQ6 1270 aa22.19■■□□□ 1.14
HERC6-204ENST00000502870 SH3RF3Q8TEJ3 882 aaPredicted RBP22.19■■□□□ 1.14
HERC6-204ENST00000502870 NEUROD6Q96NK8 337 aa22.19■■□□□ 1.14
HERC6-204ENST00000502870 PRDM5Q9NQX1 630 aaPredicted RBP22.19■■□□□ 1.14
HERC6-204ENST00000502870 LRP2BPQ9P2M1 347 aa22.19■■□□□ 1.14
HERC6-204ENST00000502870 HOXC6P09630 235 aa22.18■■□□□ 1.14
HERC6-204ENST00000502870 PTPREP23469 700 aa22.18■■□□□ 1.14
HERC6-204ENST00000502870 ALDH1L2Q3SY69 923 aa22.18■■□□□ 1.14
HERC6-204ENST00000502870 TBC1D9Q6ZT07 1266 aa22.18■■□□□ 1.14
HERC6-204ENST00000502870 USP17L15C9J2P7 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L13C9JLJ4 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L11C9JVI0 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L18D6R9N7 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L22D6RA61 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L17D6RBQ6 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L19D6RCP7 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L20D6RJB6 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 GDF11O95390 407 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 USP17L24Q0WX57 530 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 TFCP2Q12800 502 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 C9orf50Q5SZB4 431 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 METTL16Q86W50 562 aaKnown RBP22.17■■□□□ 1.14
HERC6-204ENST00000502870 FEZ1Q99689 392 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 EMILIN3Q9NT22 766 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 FLRT1Q9NZU1 646 aa22.17■■□□□ 1.14
HERC6-204ENST00000502870 HLA-DOAP06340 250 aa22.16■■□□□ 1.14
HERC6-204ENST00000502870 BADQ92934 168 aa22.16■■□□□ 1.14
HERC6-204ENST00000502870 C12orf42Q96LP6 360 aa22.16■■□□□ 1.14
HERC6-204ENST00000502870 TTYH1Q9H313 450 aaPredicted RBP22.16■■□□□ 1.14
HERC6-204ENST00000502870 AATFQ9NY61 560 aaKnown RBP eCLIP22.16■■□□□ 1.14
HERC6-204ENST00000502870 FLT1P17948 1338 aa22.15■■□□□ 1.14
HERC6-204ENST00000502870 ARID4AP29374 1257 aaPredicted RBP22.15■■□□□ 1.14
HERC6-204ENST00000502870 USP14P54578 494 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms