RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 WBP1LQ9NX94 342 aa29.99■■■□□ 2.39
LSM6-202ENST00000502781 KCNH4Q9UQ05 1017 aa29.99■■■□□ 2.39
LSM6-202ENST00000502781 LAMB1P07942 1786 aa29.98■■■□□ 2.39
LSM6-202ENST00000502781 MANSC4A6NHS7 340 aaPredicted RBP29.98■■■□□ 2.39
LSM6-202ENST00000502781 ASNSP08243 561 aa29.98■■■□□ 2.39
LSM6-202ENST00000502781 TM4SF4P48230 202 aa29.98■■■□□ 2.39
LSM6-202ENST00000502781 CDK8P49336 464 aa29.98■■■□□ 2.39
LSM6-202ENST00000502781 MAP2K1Q02750 393 aaPredicted RBP29.98■■■□□ 2.39
LSM6-202ENST00000502781 CERKLQ49MI3 558 aaPredicted RBP29.98■■■□□ 2.39
LSM6-202ENST00000502781 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.98■■■□□ 2.39
LSM6-202ENST00000502781 TESPA1A2RU30 521 aaPredicted RBP29.97■■■□□ 2.39
LSM6-202ENST00000502781 MINDY4BA8MYZ0 360 aa29.97■■■□□ 2.39
LSM6-202ENST00000502781 GDF11O95390 407 aa29.97■■■□□ 2.39
LSM6-202ENST00000502781 FGAP02671 866 aa29.97■■■□□ 2.39
LSM6-202ENST00000502781 SHROOM1Q2M3G4 852 aaPredicted RBP29.97■■■□□ 2.39
LSM6-202ENST00000502781 RUFY2Q8WXA3 655 aa29.97■■■□□ 2.39
LSM6-202ENST00000502781 ZBTB21Q9ULJ3 1066 aa29.97■■■□□ 2.39
LSM6-202ENST00000502781 ZHX2Q9Y6X8 837 aa29.97■■■□□ 2.39
LSM6-202ENST00000502781 PCNTO95613 3336 aa29.96■■■□□ 2.39
LSM6-202ENST00000502781 INHBEP58166 350 aa29.96■■■□□ 2.39
LSM6-202ENST00000502781 AFG3L2Q9Y4W6 797 aa29.96■■■□□ 2.39
LSM6-202ENST00000502781 SGSM2O43147 1006 aa29.95■■■□□ 2.39
LSM6-202ENST00000502781 GTF2A2P52657 109 aa29.95■■■□□ 2.39
LSM6-202ENST00000502781 PPARAQ07869 468 aa29.95■■■□□ 2.39
LSM6-202ENST00000502781 SREBF2Q12772 1141 aa29.95■■■□□ 2.39
LSM6-202ENST00000502781 DSCC1Q9BVC3 393 aa29.95■■■□□ 2.39
LSM6-202ENST00000502781 CXCL11O14625 94 aa29.94■■■□□ 2.38
LSM6-202ENST00000502781 CCDC84Q86UT8 332 aaPredicted RBP29.94■■■□□ 2.38
LSM6-202ENST00000502781 TBC1D2Q9BYX2 928 aa29.94■■■□□ 2.38
LSM6-202ENST00000502781 ANAPC4Q9UJX5 808 aa29.94■■■□□ 2.38
LSM6-202ENST00000502781 USP17L5A8MUK1 530 aa29.93■■■□□ 2.38
LSM6-202ENST00000502781 GH2P01242 217 aa29.93■■■□□ 2.38
LSM6-202ENST00000502781 SNAPC2Q13487 334 aa29.93■■■□□ 2.38
LSM6-202ENST00000502781 ABCB5Q2M3G0 1257 aa29.93■■■□□ 2.38
LSM6-202ENST00000502781 BRI3BPQ8WY22 251 aa29.92■■■□□ 2.38
LSM6-202ENST00000502781 CCDC17Q96LX7 622 aa29.92■■■□□ 2.38
LSM6-202ENST00000502781 WDR18Q9BV38 432 aa29.92■■■□□ 2.38
LSM6-202ENST00000502781 PHIPQ8WWQ0 1821 aa29.92■■■□□ 2.38
LSM6-202ENST00000502781 GUCY1A2P33402 732 aa29.91■■■□□ 2.38
LSM6-202ENST00000502781 ATAD5Q96QE3 1844 aa29.91■■■□□ 2.38
LSM6-202ENST00000502781 CETPP11597 493 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 ZNF280CQ8ND82 737 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 PTPN18Q99952 460 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 CABP5Q9NP86 173 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 CCL15-CCL14A0A0B4J2E2 113 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 RASA1P20936 1047 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 MOGSQ13724 837 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 CCL15Q16663 113 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 IFNL1Q8IU54 200 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 AS3MTQ9HBK9 375 aa29.9■■■□□ 2.38
LSM6-202ENST00000502781 A0A0G2JLL6 359 aaPredicted RBP29.89■■■□□ 2.37
LSM6-202ENST00000502781 IGF2BP3O00425 579 aaKnown RBP eCLIP29.89■■■□□ 2.37
LSM6-202ENST00000502781 FGRP09769 529 aa29.89■■■□□ 2.37
LSM6-202ENST00000502781 AKR1B1P15121 316 aa29.89■■■□□ 2.37
LSM6-202ENST00000502781 TMEM179Q6ZVK1 233 aa29.89■■■□□ 2.37
LSM6-202ENST00000502781 PRRT2Q7Z6L0 340 aaPredicted RBP29.89■■■□□ 2.37
LSM6-202ENST00000502781 ESYT1Q9BSJ8 1104 aa29.89■■■□□ 2.37
LSM6-202ENST00000502781 ZNF287Q9HBT7 754 aa29.89■■■□□ 2.37
LSM6-202ENST00000502781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.89■■■□□ 2.37
LSM6-202ENST00000502781 CDC45O75419 566 aa29.88■■■□□ 2.37
LSM6-202ENST00000502781 SLC3A2P08195 630 aaKnown RBP29.88■■■□□ 2.37
LSM6-202ENST00000502781 HSPA1AP0DMV8 641 aaKnown RBP29.88■■■□□ 2.37
LSM6-202ENST00000502781 HSPA1BP0DMV9 641 aaKnown RBP29.88■■■□□ 2.37
LSM6-202ENST00000502781 SPP2Q13103 211 aa29.88■■■□□ 2.37
LSM6-202ENST00000502781 TACC3Q9Y6A5 838 aa29.88■■■□□ 2.37
LSM6-202ENST00000502781 TRIM75PA6NK02 468 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 CTDSPL2Q05D32 466 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 PDE4BQ07343 736 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 SEPT2Q15019 361 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 STK11IPQ8N1F8 1099 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 MKNK2Q9HBH9 465 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 RNF186Q9NXI6 227 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 SAGE1Q9NXZ1 904 aa29.87■■■□□ 2.37
LSM6-202ENST00000502781 CA12O43570 354 aa29.86■■■□□ 2.37
LSM6-202ENST00000502781 RAB3GAP1Q15042 981 aa29.86■■■□□ 2.37
LSM6-202ENST00000502781 BEGAINQ9BUH8 593 aa29.86■■■□□ 2.37
LSM6-202ENST00000502781 NBPF3Q9H094 633 aa29.86■■■□□ 2.37
LSM6-202ENST00000502781 PRDM1O75626 825 aa29.85■■■□□ 2.37
LSM6-202ENST00000502781 PTH1RQ03431 593 aa29.85■■■□□ 2.37
LSM6-202ENST00000502781 SH3D19Q5HYK7 790 aa29.85■■■□□ 2.37
LSM6-202ENST00000502781 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.85■■■□□ 2.37
LSM6-202ENST00000502781 MPHOSPH10O00566 681 aaKnown RBP29.84■■■□□ 2.37
LSM6-202ENST00000502781 ALDH1A1P00352 501 aa29.84■■■□□ 2.37
LSM6-202ENST00000502781 BACE1P56817 501 aa29.84■■■□□ 2.37
LSM6-202ENST00000502781 CFHR5Q9BXR6 569 aa29.84■■■□□ 2.37
LSM6-202ENST00000502781 CTNNA3Q9UI47 895 aa29.84■■■□□ 2.37
LSM6-202ENST00000502781 BTBD19C9JJ37 291 aa29.83■■■□□ 2.37
LSM6-202ENST00000502781 ORC4O43929 436 aa29.83■■■□□ 2.37
LSM6-202ENST00000502781 FASTKD5Q7L8L6 764 aaKnown RBP29.83■■■□□ 2.37
LSM6-202ENST00000502781 FAM43AQ8N2R8 423 aa29.83■■■□□ 2.37
LSM6-202ENST00000502781 MAP4K1Q92918 833 aa29.83■■■□□ 2.37
LSM6-202ENST00000502781 ZCCHC17Q9NP64 241 aaKnown RBP29.83■■■□□ 2.37
LSM6-202ENST00000502781 PTPRFP10586 1907 aa29.82■■■□□ 2.36
LSM6-202ENST00000502781 MYH8P13535 1937 aa29.82■■■□□ 2.36
LSM6-202ENST00000502781 USP17L10C9JJH3 530 aa29.82■■■□□ 2.36
LSM6-202ENST00000502781 HAND2P61296 217 aa29.82■■■□□ 2.36
LSM6-202ENST00000502781 OTUD7BQ6GQQ9 843 aa29.82■■■□□ 2.36
LSM6-202ENST00000502781 GPAT2Q6NUI2 795 aa29.82■■■□□ 2.36
LSM6-202ENST00000502781 ANKRD23Q86SG2 305 aa29.82■■■□□ 2.36
LSM6-202ENST00000502781 SIAH1Q8IUQ4 282 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms