RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 PABPC4Q13310 644 aaKnown RBP eCLIP15.67■□□□□ 0.1
LMNA-218ENST00000502357 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
LMNA-218ENST00000502357 CCL14Q16627 93 aa15.67■□□□□ 0.1
LMNA-218ENST00000502357 ADGRA1Q86SQ6 560 aa15.67■□□□□ 0.1
LMNA-218ENST00000502357 CNMDO75829 334 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 LDHCP07864 332 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 PPP4CP60510 307 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 GUCD1Q96NT3 240 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 PI4KBQ9UBF8 816 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 AKAP2Q9Y2D5 859 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 MAST2Q6P0Q8 1798 aa15.66■□□□□ 0.1
LMNA-218ENST00000502357 GPR142Q7Z601 462 aa15.65■□□□□ 0.1
LMNA-218ENST00000502357 TEX11Q8IYF3 940 aa15.65■□□□□ 0.1
LMNA-218ENST00000502357 GPRC5AQ8NFJ5 357 aa15.65■□□□□ 0.1
LMNA-218ENST00000502357 COL25A1Q9BXS0 654 aaPredicted RBP15.65■□□□□ 0.1
LMNA-218ENST00000502357 UBE2OQ9C0C9 1292 aaKnown RBP15.65■□□□□ 0.1
LMNA-218ENST00000502357 AS3MTQ9HBK9 375 aa15.65■□□□□ 0.1
LMNA-218ENST00000502357 FLRT1Q9NZU1 646 aa15.65■□□□□ 0.1
LMNA-218ENST00000502357 C19orf81C9J6K1 198 aa15.64■□□□□ 0.09
LMNA-218ENST00000502357 SRGAP3O43295 1099 aa15.64■□□□□ 0.09
LMNA-218ENST00000502357 ERVK-9P63128 1117 aa15.64■□□□□ 0.09
LMNA-218ENST00000502357 ERVK-24P63145 666 aa15.64■□□□□ 0.09
LMNA-218ENST00000502357 GSTO1P78417 241 aa15.64■□□□□ 0.09
LMNA-218ENST00000502357 SOCS4Q8WXH5 440 aa15.64■□□□□ 0.09
LMNA-218ENST00000502357 API5Q9BZZ5 524 aaKnown RBP15.64■□□□□ 0.09
LMNA-218ENST00000502357 DHX36Q9H2U1 1008 aaKnown RBP15.64■□□□□ 0.09
LMNA-218ENST00000502357 EYSQ5T1H1 3165 aa15.64■□□□□ 0.09
LMNA-218ENST00000502357 PNMA6EA0A0J9YXQ4 647 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 ASNSP08243 561 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 MAPK4P31152 587 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 IRX3P78415 501 aaPredicted RBP15.63■□□□□ 0.09
LMNA-218ENST00000502357 FAM109BQ6ICB4 259 aaPredicted RBP15.63■□□□□ 0.09
LMNA-218ENST00000502357 FOXP4Q8IVH2 680 aaPredicted RBP15.63■□□□□ 0.09
LMNA-218ENST00000502357 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 RAI14Q9P0K7 980 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 VCANP13611 3396 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 LTBP2Q14767 1821 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 FLT1P17948 1338 aa15.63■□□□□ 0.09
LMNA-218ENST00000502357 USP17L10C9JJH3 530 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 GDF11O95390 407 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 CT47B1P0C2W7 299 aaPredicted RBP15.62■□□□□ 0.09
LMNA-218ENST00000502357 TRMT44Q8IYL2 757 aaKnown RBP15.62■□□□□ 0.09
LMNA-218ENST00000502357 C12orf42Q96LP6 360 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 GINM1Q9NU53 330 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 AATFQ9NY61 560 aaKnown RBP eCLIP15.62■□□□□ 0.09
LMNA-218ENST00000502357 ZBTB21Q9ULJ3 1066 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 TNNQ9UQP3 1299 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 SPTBN5Q9NRC6 3674 aaKnown RBP15.62■□□□□ 0.09
LMNA-218ENST00000502357 RLFQ13129 1914 aa15.62■□□□□ 0.09
LMNA-218ENST00000502357 CYP2E1P05181 493 aaPredicted RBP15.61■□□□□ 0.09
LMNA-218ENST00000502357 ZKSCAN1P17029 563 aaPredicted RBP15.61■□□□□ 0.09
LMNA-218ENST00000502357 RARSP54136 660 aaKnown RBP15.61■□□□□ 0.09
LMNA-218ENST00000502357 MDM2Q00987 491 aaPredicted RBP15.61■□□□□ 0.09
LMNA-218ENST00000502357 PLEKHH3Q7Z736 793 aa15.61■□□□□ 0.09
LMNA-218ENST00000502357 MAPKAPK5Q8IW41 473 aa15.61■□□□□ 0.09
LMNA-218ENST00000502357 TGFBRAP1Q8WUH2 860 aa15.61■□□□□ 0.09
LMNA-218ENST00000502357 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
LMNA-218ENST00000502357 APBA2Q99767 749 aa15.61■□□□□ 0.09
LMNA-218ENST00000502357 PALD1Q9ULE6 856 aa15.61■□□□□ 0.09
LMNA-218ENST00000502357 GNAI3P08754 354 aa15.6■□□□□ 0.09
LMNA-218ENST00000502357 RGS2P41220 211 aa15.6■□□□□ 0.09
LMNA-218ENST00000502357 MAP2K5Q13163 448 aa15.6■□□□□ 0.09
LMNA-218ENST00000502357 TATDN1Q6P1N9 297 aa15.6■□□□□ 0.09
LMNA-218ENST00000502357 TRPV1Q8NER1 839 aa15.6■□□□□ 0.09
LMNA-218ENST00000502357 TMOD4Q9NZQ9 345 aa15.6■□□□□ 0.09
LMNA-218ENST00000502357 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
LMNA-218ENST00000502357 HOXC6P09630 235 aa15.59■□□□□ 0.09
LMNA-218ENST00000502357 LBX2Q6XYB7 198 aa15.59■□□□□ 0.09
LMNA-218ENST00000502357 SNRKQ9NRH2 765 aa15.59■□□□□ 0.09
LMNA-218ENST00000502357 LRP2BPQ9P2M1 347 aa15.59■□□□□ 0.09
LMNA-218ENST00000502357 RABGAP1Q9Y3P9 1069 aa15.59■□□□□ 0.09
LMNA-218ENST00000502357 PRUNE2Q8WUY3 3088 aa15.59■□□□□ 0.09
LMNA-218ENST00000502357 MYH1P12882 1939 aa15.58■□□□□ 0.09
LMNA-218ENST00000502357 UQCRFS1P1P0C7P4 283 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 DYNLL1P63167 89 aaKnown RBP15.58■□□□□ 0.08
LMNA-218ENST00000502357 POLA2Q14181 598 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 NAA16Q6N069 864 aaPredicted RBP15.58■□□□□ 0.08
LMNA-218ENST00000502357 USP17L2Q6R6M4 530 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 CATSPERGQ6ZRH7 1159 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.58■□□□□ 0.08
LMNA-218ENST00000502357 NPLOC4Q8TAT6 608 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 GTF3C2Q8WUA4 911 aaPredicted RBP15.58■□□□□ 0.08
LMNA-218ENST00000502357 EDC3Q96F86 508 aaKnown RBP15.58■□□□□ 0.08
LMNA-218ENST00000502357 ZNF512BQ96KM6 892 aaPredicted RBP15.58■□□□□ 0.08
LMNA-218ENST00000502357 DBNDD2Q9BQY9 259 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 GPR108Q9NPR9 543 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 PIH1D3Q9NQM4 214 aaKnown RBP15.58■□□□□ 0.08
LMNA-218ENST00000502357 BTBD7Q9P203 1132 aa15.58■□□□□ 0.08
LMNA-218ENST00000502357 CDH23Q9H251 3354 aa15.57■□□□□ 0.08
LMNA-218ENST00000502357 GH2P01242 217 aa15.57■□□□□ 0.08
LMNA-218ENST00000502357 PTPREP23469 700 aa15.57■□□□□ 0.08
LMNA-218ENST00000502357 GUCY1A2P33402 732 aa15.57■□□□□ 0.08
LMNA-218ENST00000502357 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
LMNA-218ENST00000502357 PAGR1Q9BTK6 254 aa15.57■□□□□ 0.08
LMNA-218ENST00000502357 SENP6Q9GZR1 1112 aaPredicted RBP15.57■□□□□ 0.08
LMNA-218ENST00000502357 NDUFB9Q9Y6M9 179 aa15.57■□□□□ 0.08
LMNA-218ENST00000502357 SLC15A5A6NIM6 579 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms