RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 INHAP05111 366 aa31.58■■■□□ 2.65
CUL4A-211ENST00000498562 HLA-DOAP06340 250 aa31.58■■■□□ 2.65
CUL4A-211ENST00000498562 AACSQ86V21 672 aa31.58■■■□□ 2.65
CUL4A-211ENST00000498562 MIGA1Q8NAN2 632 aa31.58■■■□□ 2.65
CUL4A-211ENST00000498562 U2AF1L4Q8WU68 220 aaKnown RBP31.58■■■□□ 2.65
CUL4A-211ENST00000498562 MAGEB6Q8N7X4 407 aa31.57■■■□□ 2.64
CUL4A-211ENST00000498562 GINM1Q9NU53 330 aa31.57■■■□□ 2.64
CUL4A-211ENST00000498562 ZBTB21Q9ULJ3 1066 aa31.57■■■□□ 2.64
CUL4A-211ENST00000498562 DDX60LQ5H9U9 1706 aaKnown RBP31.57■■■□□ 2.64
CUL4A-211ENST00000498562 CERS3Q8IU89 383 aa31.56■■■□□ 2.64
CUL4A-211ENST00000498562 PLXNB2O15031 1838 aa31.55■■■□□ 2.64
CUL4A-211ENST00000498562 H0YGN5 161 aa31.54■■■□□ 2.64
CUL4A-211ENST00000498562 HOXA7P31268 230 aaPredicted RBP31.54■■■□□ 2.64
CUL4A-211ENST00000498562 IL1RAPL2Q9NP60 686 aa31.54■■■□□ 2.64
CUL4A-211ENST00000498562 TMOD4Q9NZQ9 345 aa31.54■■■□□ 2.64
CUL4A-211ENST00000498562 MORF4L1Q9UBU8 362 aa31.54■■■□□ 2.64
CUL4A-211ENST00000498562 TAOK2Q9UL54 1235 aa31.54■■■□□ 2.64
CUL4A-211ENST00000498562 C19orf81C9J6K1 198 aa31.53■■■□□ 2.64
CUL4A-211ENST00000498562 USP17L10C9JJH3 530 aa31.53■■■□□ 2.64
CUL4A-211ENST00000498562 SGPL1O95470 568 aa31.53■■■□□ 2.64
CUL4A-211ENST00000498562 IRX3P78415 501 aaPredicted RBP31.53■■■□□ 2.64
CUL4A-211ENST00000498562 MAP3K12Q12852 859 aa31.53■■■□□ 2.64
CUL4A-211ENST00000498562 HSP90AB4PQ58FF6 505 aa31.53■■■□□ 2.64
CUL4A-211ENST00000498562 TMED8Q6PL24 325 aaPredicted RBP31.53■■■□□ 2.64
CUL4A-211ENST00000498562 RHPN1Q8TCX5 695 aa31.53■■■□□ 2.64
CUL4A-211ENST00000498562 USP5P45974 858 aa31.52■■■□□ 2.64
CUL4A-211ENST00000498562 COLQQ9Y215 455 aaPredicted RBP31.52■■■□□ 2.64
CUL4A-211ENST00000498562 NAV1Q8NEY1 1877 aa31.52■■■□□ 2.64
CUL4A-211ENST00000498562 PAK6Q9NQU5 681 aaPredicted RBP31.51■■■□□ 2.63
CUL4A-211ENST00000498562 CEP290O15078 2479 aa31.51■■■□□ 2.63
CUL4A-211ENST00000498562 FARP2O94887 1054 aaPredicted RBP31.5■■■□□ 2.63
CUL4A-211ENST00000498562 MS4A1P11836 297 aa31.5■■■□□ 2.63
CUL4A-211ENST00000498562 P2RX7Q99572 595 aaKnown RBP31.5■■■□□ 2.63
CUL4A-211ENST00000498562 EHD4Q9H223 541 aa31.5■■■□□ 2.63
CUL4A-211ENST00000498562 GJD2Q9UKL4 321 aa31.5■■■□□ 2.63
CUL4A-211ENST00000498562 HERVK_113P62684 666 aa31.49■■■□□ 2.63
CUL4A-211ENST00000498562 TATDN1Q6P1N9 297 aa31.49■■■□□ 2.63
CUL4A-211ENST00000498562 DPF3Q92784 378 aa31.49■■■□□ 2.63
CUL4A-211ENST00000498562 DEFB118Q96PH6 123 aa31.49■■■□□ 2.63
CUL4A-211ENST00000498562 RIOK1Q9BRS2 568 aaKnown RBP31.49■■■□□ 2.63
CUL4A-211ENST00000498562 HTATIP2Q9BUP3 242 aa31.49■■■□□ 2.63
CUL4A-211ENST00000498562 GH2P01242 217 aa31.48■■■□□ 2.63
CUL4A-211ENST00000498562 TXNRD2Q9NNW7 524 aa31.48■■■□□ 2.63
CUL4A-211ENST00000498562 SERPINB13Q9UIV8 391 aa31.48■■■□□ 2.63
CUL4A-211ENST00000498562 PEX10O60683 326 aa31.47■■■□□ 2.63
CUL4A-211ENST00000498562 FXR1P51114 621 aaKnown RBP eCLIP31.47■■■□□ 2.63
CUL4A-211ENST00000498562 RPAP2Q8IXW5 612 aaPredicted RBP31.47■■■□□ 2.63
CUL4A-211ENST00000498562 KIF1BPQ96EK5 621 aa31.47■■■□□ 2.63
CUL4A-211ENST00000498562 EMILIN3Q9NT22 766 aa31.47■■■□□ 2.63
CUL4A-211ENST00000498562 DDX19BQ9UMR2 479 aa31.47■■■□□ 2.63
CUL4A-211ENST00000498562 HMGCRP04035 888 aa31.46■■■□□ 2.63
CUL4A-211ENST00000498562 CAPN2P17655 700 aa31.46■■■□□ 2.63
CUL4A-211ENST00000498562 TTF1Q15361 905 aaPredicted RBP31.46■■■□□ 2.63
CUL4A-211ENST00000498562 SIRT2Q8IXJ6 389 aa31.46■■■□□ 2.63
CUL4A-211ENST00000498562 CRISPLD2Q9H0B8 497 aa31.46■■■□□ 2.63
CUL4A-211ENST00000498562 ZBTB40Q9NUA8 1239 aa31.46■■■□□ 2.63
CUL4A-211ENST00000498562 COG6Q9Y2V7 657 aa31.46■■■□□ 2.63
CUL4A-211ENST00000498562 USP17L2Q6R6M4 530 aa31.45■■■□□ 2.63
CUL4A-211ENST00000498562 TTC6Q86TZ1 520 aa31.45■■■□□ 2.63
CUL4A-211ENST00000498562 CLASRPQ8N2M8 674 aaKnown RBP31.45■■■□□ 2.63
CUL4A-211ENST00000498562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.45■■■□□ 2.63
CUL4A-211ENST00000498562 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.45■■■□□ 2.635e-7■□□□□ 10.8
CUL4A-211ENST00000498562 APBB1O00213 710 aa31.44■■■□□ 2.62
CUL4A-211ENST00000498562 C12orf42Q96LP6 360 aa31.44■■■□□ 2.62
CUL4A-211ENST00000498562 HMMRO75330 724 aa31.43■■■□□ 2.62
CUL4A-211ENST00000498562 TFRCP02786 760 aaKnown RBP31.43■■■□□ 2.62
CUL4A-211ENST00000498562 PDE6AP16499 860 aa31.43■■■□□ 2.62
CUL4A-211ENST00000498562 PLCD1P51178 756 aa31.43■■■□□ 2.62
CUL4A-211ENST00000498562 GPRC5AQ8NFJ5 357 aa31.43■■■□□ 2.62
CUL4A-211ENST00000498562 RBPJLQ9UBG7 517 aa31.43■■■□□ 2.62
CUL4A-211ENST00000498562 MAGEB6P1A0A0J9YX57 407 aa31.42■■■□□ 2.62
CUL4A-211ENST00000498562 TRIM32Q13049 653 aa31.42■■■□□ 2.62
CUL4A-211ENST00000498562 SLC9C2Q5TAH2 1124 aa31.42■■■□□ 2.62
CUL4A-211ENST00000498562 POTEEQ6S8J3 1075 aa31.42■■■□□ 2.62
CUL4A-211ENST00000498562 CHRDL2Q6WN34 429 aa31.42■■■□□ 2.62
CUL4A-211ENST00000498562 GTF3C2Q8WUA4 911 aaPredicted RBP31.42■■■□□ 2.62
CUL4A-211ENST00000498562 SHMT1P34896 483 aa31.41■■■□□ 2.62
CUL4A-211ENST00000498562 ERVK-9P63128 1117 aa31.41■■■□□ 2.62
CUL4A-211ENST00000498562 ERVK-24P63145 666 aa31.41■■■□□ 2.62
CUL4A-211ENST00000498562 CERKLQ49MI3 558 aaPredicted RBP31.41■■■□□ 2.62
CUL4A-211ENST00000498562 TRIB2Q92519 343 aa31.41■■■□□ 2.62
CUL4A-211ENST00000498562 DNAJC2Q99543 621 aaKnown RBP31.41■■■□□ 2.62
CUL4A-211ENST00000498562 ALPK3Q96L96 1907 aa31.41■■■□□ 2.62
CUL4A-211ENST00000498562 GOLIM4O00461 696 aa31.4■■■□□ 2.62
CUL4A-211ENST00000498562 IFIT2P09913 472 aaKnown RBP31.4■■■□□ 2.62
CUL4A-211ENST00000498562 RAB3GAP1Q15042 981 aa31.4■■■□□ 2.62
CUL4A-211ENST00000498562 ZYXQ15942 572 aaKnown RBP31.4■■■□□ 2.62
CUL4A-211ENST00000498562 ABCB5Q2M3G0 1257 aa31.4■■■□□ 2.62
CUL4A-211ENST00000498562 Q3C1V9 767 aa31.4■■■□□ 2.62
CUL4A-211ENST00000498562 FEZ1Q99689 392 aa31.4■■■□□ 2.62
CUL4A-211ENST00000498562 RPTORQ8N122 1335 aa31.4■■■□□ 2.62
CUL4A-211ENST00000498562 ZNF532Q9HCE3 1301 aa31.4■■■□□ 2.62
CUL4A-211ENST00000498562 TCRBV5S4A2TA0A5A2 114 aa31.39■■■□□ 2.62
CUL4A-211ENST00000498562 CYP2B6P20813 491 aa31.39■■■□□ 2.62
CUL4A-211ENST00000498562 GABPAQ06546 454 aa31.39■■■□□ 2.62
CUL4A-211ENST00000498562 SOCS4Q8WXH5 440 aa31.39■■■□□ 2.62
CUL4A-211ENST00000498562 NUDT12Q9BQG2 462 aa31.39■■■□□ 2.62
CUL4A-211ENST00000498562 PAGR1Q9BTK6 254 aa31.39■■■□□ 2.62
CUL4A-211ENST00000498562 CRNKL1Q9BZJ0 848 aaKnown RBP31.39■■■□□ 2.62
CUL4A-211ENST00000498562 PORCNQ9H237 461 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms