RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NOL10Q9BSC4 688 aaKnown RBP18.09■□□□□ 0.49
TRAF4-212ENST00000498540 DHX36Q9H2U1 1008 aaKnown RBP18.09■□□□□ 0.49
TRAF4-212ENST00000498540 SNRKQ9NRH2 765 aa18.09■□□□□ 0.49
TRAF4-212ENST00000498540 TMOD4Q9NZQ9 345 aa18.09■□□□□ 0.49
TRAF4-212ENST00000498540 TNNQ9UQP3 1299 aa18.09■□□□□ 0.49
TRAF4-212ENST00000498540 FRMPD3Q5JV73 1810 aa18.09■□□□□ 0.49
TRAF4-212ENST00000498540 GDF11O95390 407 aa18.08■□□□□ 0.48
TRAF4-212ENST00000498540 UQCRFS1P1P0C7P4 283 aa18.08■□□□□ 0.48
TRAF4-212ENST00000498540 NAA16Q6N069 864 aaPredicted RBP18.08■□□□□ 0.48
TRAF4-212ENST00000498540 Q7L0L9 218 aa18.08■□□□□ 0.48
TRAF4-212ENST00000498540 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.48
TRAF4-212ENST00000498540 TGFBRAP1Q8WUH2 860 aa18.08■□□□□ 0.48
TRAF4-212ENST00000498540 SOCS4Q8WXH5 440 aa18.08■□□□□ 0.48
TRAF4-212ENST00000498540 NUDT12Q9BQG2 462 aa18.08■□□□□ 0.48
TRAF4-212ENST00000498540 XRCC5P13010 732 aaKnown RBP18.07■□□□□ 0.48
TRAF4-212ENST00000498540 G3BP1Q13283 466 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRAF4-212ENST00000498540 POTEEQ6S8J3 1075 aa18.07■□□□□ 0.48
TRAF4-212ENST00000498540 METTL16Q86W50 562 aaKnown RBP18.07■□□□□ 0.48
TRAF4-212ENST00000498540 DEFB123Q8N688 67 aa18.07■□□□□ 0.48
TRAF4-212ENST00000498540 PORCNQ9H237 461 aa18.07■□□□□ 0.48
TRAF4-212ENST00000498540 RBPJLQ9UBG7 517 aa18.07■□□□□ 0.48
TRAF4-212ENST00000498540 PALD1Q9ULE6 856 aa18.07■□□□□ 0.48
TRAF4-212ENST00000498540 A0A0C4DFX4 3053 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 C19orf81C9J6K1 198 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 USP17L10C9JJH3 530 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 BAG3O95817 575 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 GNAI2P04899 355 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 PLCG2P16885 1265 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 ZKSCAN1P17029 563 aaPredicted RBP18.06■□□□□ 0.48
TRAF4-212ENST00000498540 CACNB2Q08289 660 aaPredicted RBP18.06■□□□□ 0.48
TRAF4-212ENST00000498540 CCL14Q16627 93 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 Q3C1V9 767 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 LRIT3Q3SXY7 679 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 GPR153Q6NV75 609 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 TDHQ8IZJ6 230 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 CRACR2BQ8N4Y2 399 aaPredicted RBP18.06■□□□□ 0.48
TRAF4-212ENST00000498540 USP6NLQ92738 828 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 ZBTB21Q9ULJ3 1066 aa18.06■□□□□ 0.48
TRAF4-212ENST00000498540 COL6A1P12109 1028 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 TRIM27P14373 513 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 CCND3P30281 292 aaPredicted RBP18.05■□□□□ 0.48
TRAF4-212ENST00000498540 MAPK4P31152 587 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 PPP4CP60510 307 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 ERVK-9P63128 1117 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 ERVK-24P63145 666 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 PDE3AQ14432 1141 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 TTC39AQ5SRH9 613 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 DBNDD2Q9BQY9 259 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 PAGR1Q9BTK6 254 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 SAP30BPQ9UHR5 308 aaKnown RBP18.05■□□□□ 0.48
TRAF4-212ENST00000498540 MYH1P12882 1939 aa18.05■□□□□ 0.48
TRAF4-212ENST00000498540 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
TRAF4-212ENST00000498540 MORN1Q5T089 497 aa18.04■□□□□ 0.48
TRAF4-212ENST00000498540 LHX8Q68G74 356 aa18.04■□□□□ 0.48
TRAF4-212ENST00000498540 GPR142Q7Z601 462 aa18.04■□□□□ 0.48
TRAF4-212ENST00000498540 FOXP4Q8IVH2 680 aaPredicted RBP18.04■□□□□ 0.48
TRAF4-212ENST00000498540 TRIM34Q9BYJ4 488 aa18.04■□□□□ 0.48
TRAF4-212ENST00000498540 UBE2OQ9C0C9 1292 aaKnown RBP18.04■□□□□ 0.48
TRAF4-212ENST00000498540 EMILIN3Q9NT22 766 aa18.04■□□□□ 0.48
TRAF4-212ENST00000498540 CUL9Q8IWT3 2517 aa18.03■□□□□ 0.48
TRAF4-212ENST00000498540 RGS2P41220 211 aa18.03■□□□□ 0.48
TRAF4-212ENST00000498540 LRRC26Q2I0M4 334 aa18.03■□□□□ 0.48
TRAF4-212ENST00000498540 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
TRAF4-212ENST00000498540 TRMT44Q8IYL2 757 aaKnown RBP18.03■□□□□ 0.48
TRAF4-212ENST00000498540 APBA2Q99767 749 aa18.03■□□□□ 0.48
TRAF4-212ENST00000498540 GINM1Q9NU53 330 aa18.03■□□□□ 0.48
TRAF4-212ENST00000498540 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
TRAF4-212ENST00000498540 DYNLL1P63167 89 aaKnown RBP18.02■□□□□ 0.48
TRAF4-212ENST00000498540 PLEKHH3Q7Z736 793 aa18.02■□□□□ 0.48
TRAF4-212ENST00000498540 CCAR1Q8IX12 1150 aaKnown RBP18.02■□□□□ 0.48
TRAF4-212ENST00000498540 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
TRAF4-212ENST00000498540 PIH1D3Q9NQM4 214 aaKnown RBP18.02■□□□□ 0.48
TRAF4-212ENST00000498540 GH2P01242 217 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 ZAP70P43403 619 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 ZYXQ15942 572 aaKnown RBP18.01■□□□□ 0.47
TRAF4-212ENST00000498540 CCDC158Q5M9N0 1113 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 USP17L2Q6R6M4 530 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 ATF7IPQ6VMQ6 1270 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 GTF3C2Q8WUA4 911 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-212ENST00000498540 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-212ENST00000498540 GPR108Q9NPR9 543 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 STXBP5LQ9Y2K9 1186 aa18.01■□□□□ 0.47
TRAF4-212ENST00000498540 BCAR3O75815 825 aa18■□□□□ 0.47
TRAF4-212ENST00000498540 CNMDO75829 334 aa18■□□□□ 0.47
TRAF4-212ENST00000498540 HLA-DOAP06340 250 aa18■□□□□ 0.47
TRAF4-212ENST00000498540 MDM2Q00987 491 aaPredicted RBP18■□□□□ 0.47
TRAF4-212ENST00000498540 POLA2Q14181 598 aa18■□□□□ 0.47
TRAF4-212ENST00000498540 NDUFB9Q9Y6M9 179 aa18■□□□□ 0.47
TRAF4-212ENST00000498540 DNAH12Q6ZR08 3092 aa18■□□□□ 0.47
TRAF4-212ENST00000498540 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
TRAF4-212ENST00000498540 MAP2K5Q13163 448 aa17.99■□□□□ 0.47
TRAF4-212ENST00000498540 C12orf42Q96LP6 360 aa17.99■□□□□ 0.47
TRAF4-212ENST00000498540 FEZ1Q99689 392 aa17.99■□□□□ 0.47
TRAF4-212ENST00000498540 CWC22Q9HCG8 908 aaKnown RBP17.99■□□□□ 0.47
TRAF4-212ENST00000498540 TLR7Q9NYK1 1049 aaKnown RBP17.99■□□□□ 0.47
TRAF4-212ENST00000498540 FLRT1Q9NZU1 646 aa17.99■□□□□ 0.47
TRAF4-212ENST00000498540 CYP7A1P22680 504 aa17.98■□□□□ 0.47
TRAF4-212ENST00000498540 OS9Q13438 667 aaPredicted RBP17.98■□□□□ 0.47
TRAF4-212ENST00000498540 TATDN1Q6P1N9 297 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms