RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 ASNSP08243 561 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 CNGA1P29973 690 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 ATN1P54259 1190 aaPredicted RBP14.4□□□□□ -0.1
CDK9-205ENST00000498339 BACE1P56817 501 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 ERVK-9P63128 1117 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 ERVK-24P63145 666 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 GPR142Q7Z601 462 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 CRACR2BQ8N4Y2 399 aaPredicted RBP14.4□□□□□ -0.1
CDK9-205ENST00000498339 XAGE2Q96GT9 111 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 SMC4Q9NTJ3 1288 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 AKAP2Q9Y2D5 859 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 CDH23Q9H251 3354 aa14.4□□□□□ -0.1
CDK9-205ENST00000498339 MYH1P12882 1939 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 GDF11O95390 407 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 LHX8Q68G74 356 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 FAM109BQ6ICB4 259 aaPredicted RBP14.39□□□□□ -0.11
CDK9-205ENST00000498339 PI16Q6UXB8 463 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 TBC1D9Q6ZT07 1266 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 PLEKHH3Q7Z736 793 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 SH3RF3Q8TEJ3 882 aaPredicted RBP14.39□□□□□ -0.11
CDK9-205ENST00000498339 GTF3C2Q8WUA4 911 aaPredicted RBP14.39□□□□□ -0.11
CDK9-205ENST00000498339 NSUN4Q96CB9 384 aaKnown RBP14.39□□□□□ -0.11
CDK9-205ENST00000498339 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 PORCNQ9H237 461 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 PI4KBQ9UBF8 816 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 HDAC5Q9UQL6 1122 aa14.39□□□□□ -0.11
CDK9-205ENST00000498339 MYO5AQ9Y4I1 1855 aaKnown RBP14.39□□□□□ -0.11
CDK9-205ENST00000498339 C19orf81C9J6K1 198 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 USP17L10C9JJH3 530 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
CDK9-205ENST00000498339 TFCP2Q12800 502 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 SPATA5Q8NB90 893 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 ZNF384Q8TF68 577 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 FEZ1Q99689 392 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 COPRSQ9NQ92 184 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 HMG20BQ9P0W2 317 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 LRP2BPQ9P2M1 347 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 RLFQ13129 1914 aa14.38□□□□□ -0.11
CDK9-205ENST00000498339 SPTBN5Q9NRC6 3674 aaKnown RBP14.37□□□□□ -0.11
CDK9-205ENST00000498339 ZBTB22O15209 634 aa14.37□□□□□ -0.11
CDK9-205ENST00000498339 GLRX3O76003 335 aaKnown RBP14.37□□□□□ -0.11
CDK9-205ENST00000498339 MAP2K5Q13163 448 aa14.37□□□□□ -0.11
CDK9-205ENST00000498339 ZYXQ15942 572 aaKnown RBP14.37□□□□□ -0.11
CDK9-205ENST00000498339 Q3C1V9 767 aa14.37□□□□□ -0.11
CDK9-205ENST00000498339 MORN1Q5T089 497 aa14.37□□□□□ -0.11
CDK9-205ENST00000498339 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
CDK9-205ENST00000498339 MAFAQ8NHW3 353 aaPredicted RBP14.37□□□□□ -0.11
CDK9-205ENST00000498339 DHX36Q9H2U1 1008 aaKnown RBP14.37□□□□□ -0.11
CDK9-205ENST00000498339 PRDM5Q9NQX1 630 aaPredicted RBP14.37□□□□□ -0.11
CDK9-205ENST00000498339 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDK9-205ENST00000498339 RBPJLQ9UBG7 517 aa14.37□□□□□ -0.11
CDK9-205ENST00000498339 ATP11BQ9Y2G3 1177 aa14.37□□□□□ -0.11
CDK9-205ENST00000498339 BAG3O95817 575 aa14.36□□□□□ -0.11
CDK9-205ENST00000498339 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
CDK9-205ENST00000498339 RTP1P59025 263 aa14.36□□□□□ -0.11
CDK9-205ENST00000498339 CCNA1P78396 465 aa14.36□□□□□ -0.11
CDK9-205ENST00000498339 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
CDK9-205ENST00000498339 TGFBRAP1Q8WUH2 860 aa14.36□□□□□ -0.11
CDK9-205ENST00000498339 USP6NLQ92738 828 aa14.36□□□□□ -0.11
CDK9-205ENST00000498339 CDX2Q99626 313 aaPredicted RBP14.36□□□□□ -0.11
CDK9-205ENST00000498339 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
CDK9-205ENST00000498339 ZBTB21Q9ULJ3 1066 aa14.36□□□□□ -0.11
CDK9-205ENST00000498339 IVNS1ABPQ9Y6Y0 642 aa14.36□□□□□ -0.11
CDK9-205ENST00000498339 E9PSI1 815 aa14.35□□□□□ -0.11
CDK9-205ENST00000498339 SRGAP3O43295 1099 aa14.35□□□□□ -0.11
CDK9-205ENST00000498339 MSCO60682 206 aa14.35□□□□□ -0.11
CDK9-205ENST00000498339 PLCG2P16885 1265 aa14.35□□□□□ -0.11
CDK9-205ENST00000498339 ATP2B2Q01814 1243 aa14.35□□□□□ -0.11
CDK9-205ENST00000498339 ALDH1L2Q3SY69 923 aa14.35□□□□□ -0.11
CDK9-205ENST00000498339 NAA16Q6N069 864 aaPredicted RBP14.35□□□□□ -0.11
CDK9-205ENST00000498339 USP17L2Q6R6M4 530 aa14.35□□□□□ -0.11
CDK9-205ENST00000498339 EDC3Q96F86 508 aaKnown RBP14.35□□□□□ -0.11
CDK9-205ENST00000498339 SAP30BPQ9UHR5 308 aaKnown RBP14.35□□□□□ -0.11
CDK9-205ENST00000498339 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 DNM1LO00429 736 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 HLA-DOAP06340 250 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 FOSL2P15408 326 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 JAG1P78504 1218 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 MYLIPQ8WY64 445 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 LPAR1Q92633 364 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 MEIS3Q99687 375 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 DNAJC18Q9H819 358 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 FLRT1Q9NZU1 646 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 FLT1P17948 1338 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 ZNF521Q96K83 1311 aa14.34□□□□□ -0.11
CDK9-205ENST00000498339 ARID4AP29374 1257 aaPredicted RBP14.33□□□□□ -0.12
CDK9-205ENST00000498339 MCAMP43121 646 aa14.33□□□□□ -0.12
CDK9-205ENST00000498339 SHHQ15465 462 aa14.33□□□□□ -0.12
CDK9-205ENST00000498339 GJC2Q5T442 439 aaPredicted RBP14.33□□□□□ -0.12
CDK9-205ENST00000498339 ATF7IPQ6VMQ6 1270 aa14.33□□□□□ -0.12
CDK9-205ENST00000498339 PRDM6Q9NQX0 595 aa14.33□□□□□ -0.12
CDK9-205ENST00000498339 EMILIN3Q9NT22 766 aa14.33□□□□□ -0.12
CDK9-205ENST00000498339 GINM1Q9NU53 330 aa14.33□□□□□ -0.12
CDK9-205ENST00000498339 PALD1Q9ULE6 856 aa14.33□□□□□ -0.12
CDK9-205ENST00000498339 NOB1Q9ULX3 412 aaKnown RBP14.33□□□□□ -0.12
CDK9-205ENST00000498339 RABGAP1Q9Y3P9 1069 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms