RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 PRMT2P55345 433 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 SLC4A8Q2Y0W8 1093 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 SLC9C1Q4G0N8 1177 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 NBPF11Q86T75 865 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 SMCR8Q8TEV9 937 aaPredicted RBP10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 ARMC5Q96C12 935 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 BOLA2Q9H3K6 86 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 PAG1Q9NWQ8 432 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 PNMA3Q9UL41 463 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 ZNF532Q9HCE3 1301 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 TNRC18O15417 2968 aaPredicted RBP10.27□□□□□ -0.76
HMGXB4-207ENST00000498212 SMARCA5O60264 1052 aaPredicted RBP10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 GDF11O95390 407 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 ATP5JP18859 108 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 OSBPP22059 807 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 HOXD10P28358 340 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 CTGFP29279 349 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 HMGCS2P54868 508 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 TREML2Q5T2D2 321 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 TTC6Q86TZ1 520 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 EDC3Q96F86 508 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 RIOK1Q9BRS2 568 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 WDR18Q9BV38 432 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 GINM1Q9NU53 330 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 HTTP42858 3142 aa10.27□□□□□ -0.77
HMGXB4-207ENST00000498212 TCRBV5S4A2TA0A5A2 114 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 POTEFA5A3E0 1075 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 FCGRTP55899 365 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 JAG1P78504 1218 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 PABPC4Q13310 644 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 MTMR2Q13614 643 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 ZNF333Q96JL9 665 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 HAUS7Q99871 368 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 CRNKL1Q9BZJ0 848 aaKnown RBP10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 EHD4Q9H223 541 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 DCTPP1Q9H773 170 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 SRRDQ9UH36 339 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 SERPINB13Q9UIV8 391 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 ZBTB21Q9ULJ3 1066 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 MYPNQ86TC9 1320 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 PLXNB2O15031 1838 aa10.26□□□□□ -0.77
HMGXB4-207ENST00000498212 C19orf81C9J6K1 198 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 POLR3DP05423 398 aaPredicted RBP10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 ADD2P35612 726 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 RRP1P56182 461 aaKnown RBP10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 BACE1P56817 501 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 SHROOM1Q2M3G4 852 aaPredicted RBP10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 TATDN1Q6P1N9 297 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 LCORLQ8N3X6 602 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 ANKRD13CQ8N6S4 541 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 RAET1EQ8TD07 263 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 SH3TC2Q8TF17 1288 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 TMEM106CQ9BVX2 250 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 TMOD4Q9NZQ9 345 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 CENPFP49454 3210 aa10.25□□□□□ -0.77
HMGXB4-207ENST00000498212 GH2P01242 217 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 PLCD1P51178 756 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 FAM110CQ1W6H9 321 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 CERKLQ49MI3 558 aaPredicted RBP10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 ZSCAN25Q6NSZ9 544 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 SDR42E1Q8WUS8 393 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 GPATCH3Q96I76 525 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 ASCC2Q9H1I8 757 aaPredicted RBP10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 ECHDC1Q9NTX5 307 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 MCM9Q9NXL9 1143 aa10.24□□□□□ -0.77
HMGXB4-207ENST00000498212 TNPO2O14787 897 aaKnown RBP10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 MBD4O95243 580 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 MYCP01106 439 aaPredicted RBP10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 EN2P19622 333 aaPredicted RBP10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 GRK4P32298 578 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 SHMT1P34896 483 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 GCLCP48506 637 aaPredicted RBP10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 IRX3P78415 501 aaPredicted RBP10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 PRKCZQ05513 592 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 UBE3CQ15386 1083 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 ABCB5Q2M3G0 1257 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 SLFNL1Q499Z3 407 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 ARMT1Q9H993 441 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 CABP5Q9NP86 173 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 DCP1AQ9NPI6 582 aaPredicted RBP10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 GABRQQ9UN88 632 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 PCDHB15Q9Y5E8 787 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 KIAA0100Q14667 2235 aaKnown RBP10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 PARP14Q460N5 1801 aa10.23□□□□□ -0.77
HMGXB4-207ENST00000498212 HOXA7P31268 230 aaPredicted RBP10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 GABPAQ06546 454 aa10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 RAB3GAP1Q15042 981 aa10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 ZYXQ15942 572 aaKnown RBP10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 USP17L2Q6R6M4 530 aa10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 COA7Q96BR5 231 aa10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 FEZ1Q99689 392 aa10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
HMGXB4-207ENST00000498212 ATP8A2Q9NTI2 1148 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms