RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ADAMTS1Q9UHI8 967 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 LEMD3Q9Y2U8 911 aa4.81□□□□□ -1.64
RIF1-212ENST00000498041 LRIG2O94898 1065 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 PGRP06401 933 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 FAM87AP0C7U9 286 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 HDLBPQ00341 1268 aaKnown RBP4.8□□□□□ -1.64
RIF1-212ENST00000498041 CWF19L2Q2TBE0 894 aaKnown RBP4.8□□□□□ -1.64
RIF1-212ENST00000498041 ZNF394Q53GI3 561 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 ZNF765Q7L2R6 523 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 REC114Q7Z4M0 266 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 METTL16Q86W50 562 aaKnown RBP4.8□□□□□ -1.64
RIF1-212ENST00000498041 KIAA0825Q8IV33 1275 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 FBXO27Q8NI29 283 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 SPON2Q9BUD6 331 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 DUSP23Q9BVJ7 150 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 LRRC3Q9BY71 257 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 FBRSQ9HAH7 460 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 PIM2Q9P1W9 311 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 ADAM30Q9UKF2 790 aa4.8□□□□□ -1.64
RIF1-212ENST00000498041 TLR3O15455 904 aaKnown RBP4.79□□□□□ -1.64
RIF1-212ENST00000498041 PLCG1P19174 1290 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 SLBPQ14493 270 aaKnown RBP eCLIP4.79□□□□□ -1.64
RIF1-212ENST00000498041 NKG7Q16617 165 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 SLC6A19Q695T7 634 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 ARMCX6Q7L4S7 300 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 MRPL41Q8IXM3 137 aaKnown RBP4.79□□□□□ -1.64
RIF1-212ENST00000498041 ZNF654Q8IZM8 581 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 TOP6BLQ8N6T0 577 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 MFSD2AQ8NA29 543 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 NT5C1AQ9BXI3 368 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 FOXQ1Q9C009 403 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 PRDM10Q9NQV6 1147 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 DDX41Q9UJV9 622 aaKnown RBP4.79□□□□□ -1.64
RIF1-212ENST00000498041 PCDHGB7Q9Y5F8 929 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 CORINQ9Y5Q5 1042 aa4.79□□□□□ -1.64
RIF1-212ENST00000498041 PRR36Q9H6K5 1346 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 CYP26A1O43174 497 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 LEFTY1O75610 366 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 CST3P01034 146 aaPredicted RBP4.78□□□□□ -1.64
RIF1-212ENST00000498041 FOSL1P15407 271 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 RACK1P63244 317 aaKnown RBP4.78□□□□□ -1.64
RIF1-212ENST00000498041 APOBRQ0VD83 1088 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 TMEM201Q5SNT2 666 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 C9orf131Q5VYM1 1079 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 NT5DC4Q86YG4 428 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 MCATQ8IVS2 390 aaKnown RBP4.78□□□□□ -1.64
RIF1-212ENST00000498041 ACSF2Q96CM8 615 aaPredicted RBP4.78□□□□□ -1.64
RIF1-212ENST00000498041 TMEM87BQ96K49 555 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 UBP1Q9NZI7 540 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 TJP2Q9UDY2 1190 aa4.78□□□□□ -1.64
RIF1-212ENST00000498041 POLR3KQ9Y2Y1 108 aaPredicted RBP4.78□□□□□ -1.64
RIF1-212ENST00000498041 E9PSI1 815 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 GRIN3BO60391 1043 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 HTR3BO95264 441 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 C8AP07357 584 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 CRKP46108 304 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 JAG1P78504 1218 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 MLECQ14165 292 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 SEZ6Q53EL9 994 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 PRAMEF13Q5VWM6 474 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 SLITRK4Q8IW52 837 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 NKD1Q969G9 470 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 EAF1Q96JC9 268 aaPredicted RBP4.77□□□□□ -1.65
RIF1-212ENST00000498041 LRRC4CQ9HCJ2 640 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 BRMS1Q9HCU9 246 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 REV1Q9UBZ9 1251 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 CCDC39Q9UFE4 941 aa4.77□□□□□ -1.65
RIF1-212ENST00000498041 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.77□□□□□ -1.65
RIF1-212ENST00000498041 ATE1O95260 518 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 TCF3P15923 654 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 ZNF165P49910 485 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 YARSP54577 528 aaKnown RBP4.76□□□□□ -1.65
RIF1-212ENST00000498041 REXO1Q8N1G1 1221 aaKnown RBP4.76□□□□□ -1.65
RIF1-212ENST00000498041 FAM13CQ8NE31 585 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 FLCNQ8NFG4 579 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 ASIC4Q96FT7 647 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 MIPEPQ99797 713 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 GTF2IRD1Q9UHL9 959 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 PCDHB14Q9Y5E9 798 aa4.76□□□□□ -1.65
RIF1-212ENST00000498041 UPK3BL1B0FP48 263 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 UPK3BL2E5RIL1 263 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 IGF2BP3O00425 579 aaKnown RBP eCLIP4.75□□□□□ -1.65
RIF1-212ENST00000498041 SLITRK5O94991 958 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 EOMESO95936 686 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 MCM4P33991 863 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 ZNF746Q6NUN9 644 aaPredicted RBP4.75□□□□□ -1.65
RIF1-212ENST00000498041 LETMD1Q6P1Q0 360 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 ARHGAP27Q6ZUM4 889 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 FAM214BQ7L5A3 538 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 XAGE3Q8WTP9 111 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 DPH2Q9BQC3 489 aaPredicted RBP4.75□□□□□ -1.65
RIF1-212ENST00000498041 TGIF2Q9GZN2 237 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 EHMT1Q9H9B1 1298 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 MKNK2Q9HBH9 465 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 NISCHQ9Y2I1 1504 aa4.75□□□□□ -1.65
RIF1-212ENST00000498041 CHURC1-FNTBB4DL54 471 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 CLCQ05315 142 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 RAD51AP2Q09MP3 1159 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 PAK2Q13177 524 aa4.74□□□□□ -1.65
RIF1-212ENST00000498041 ZNF124Q15973 351 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms