RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.24
ERCC8-208ENST00000497892 WNK4Q96J92 1243 aa13.57□□□□□ -0.24
ERCC8-208ENST00000497892 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
ERCC8-208ENST00000497892 SNCAIPQ9Y6H5 919 aa13.57□□□□□ -0.24
ERCC8-208ENST00000497892 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 PHF20L1A8MW92 1017 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 TBC1D12O60347 775 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 MBD4O95243 580 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 ZFYP08048 801 aaPredicted RBP13.56□□□□□ -0.24
ERCC8-208ENST00000497892 INPP5BP32019 993 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 USP5P45974 858 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 ZKSCAN4Q969J2 545 aaPredicted RBP13.56□□□□□ -0.24
ERCC8-208ENST00000497892 CRNKL1Q9BZJ0 848 aaKnown RBP13.56□□□□□ -0.24
ERCC8-208ENST00000497892 OSBPL3Q9H4L5 887 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 ARMT1Q9H993 441 aa13.56□□□□□ -0.24
ERCC8-208ENST00000497892 BAZ2AQ9UIF9 1905 aaKnown RBP13.55□□□□□ -0.24
ERCC8-208ENST00000497892 RNF113AO15541 343 aaKnown RBP13.55□□□□□ -0.24
ERCC8-208ENST00000497892 GJA5P36382 358 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 LRRFIP1Q32MZ4 808 aaKnown RBP13.55□□□□□ -0.24
ERCC8-208ENST00000497892 NOL9Q5SY16 702 aaKnown RBP13.55□□□□□ -0.24
ERCC8-208ENST00000497892 PLEKHM2Q8IWE5 1019 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 APPBP2Q92624 585 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 AIDAQ96BJ3 306 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 PI4KBQ9UBF8 816 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 HERC5Q9UII4 1024 aaKnown RBP13.55□□□□□ -0.24
ERCC8-208ENST00000497892 PALD1Q9ULE6 856 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 PHIPQ8WWQ0 1821 aa13.55□□□□□ -0.24
ERCC8-208ENST00000497892 FAM196BA6NMK8 535 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 CA12O43570 354 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 SLC34A2O95436 690 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 SLURP2P0DP57 97 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 SREBF2Q12772 1141 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 METTL16Q86W50 562 aaKnown RBP13.54□□□□□ -0.24
ERCC8-208ENST00000497892 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 EVI5LQ96CN4 794 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
ERCC8-208ENST00000497892 PUS7LQ9H0K6 701 aaKnown RBP13.54□□□□□ -0.24
ERCC8-208ENST00000497892 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
ERCC8-208ENST00000497892 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
ERCC8-208ENST00000497892 PTPRFP10586 1907 aa13.53□□□□□ -0.24
ERCC8-208ENST00000497892 MANSC4A6NHS7 340 aaPredicted RBP13.53□□□□□ -0.24
ERCC8-208ENST00000497892 FOXN1O15353 648 aa13.53□□□□□ -0.24
ERCC8-208ENST00000497892 HLA-DOAP06340 250 aa13.53□□□□□ -0.24
ERCC8-208ENST00000497892 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
ERCC8-208ENST00000497892 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
ERCC8-208ENST00000497892 SDR42E1Q8WUS8 393 aa13.53□□□□□ -0.24
ERCC8-208ENST00000497892 EHD4Q9H223 541 aa13.53□□□□□ -0.24
ERCC8-208ENST00000497892 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
ERCC8-208ENST00000497892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.53□□□□□ -0.24
ERCC8-208ENST00000497892 DCP1AQ9NPI6 582 aaPredicted RBP13.53□□□□□ -0.24
ERCC8-208ENST00000497892 PRKAB2O43741 272 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.25
ERCC8-208ENST00000497892 PDE4AP27815 886 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 TM4SF4P48230 202 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 PPATQ06203 517 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 PPIL2Q13356 520 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
ERCC8-208ENST00000497892 OSBP2Q969R2 916 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 ATP8A2Q9NTI2 1148 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 SAGE1Q9NXZ1 904 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 MYH8P13535 1937 aa13.52□□□□□ -0.25
ERCC8-208ENST00000497892 M0R2C6 588 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 IRF6O14896 467 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 GPAA1O43292 621 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 CTCFP49711 727 aaPredicted RBP13.51□□□□□ -0.25
ERCC8-208ENST00000497892 INHBEP58166 350 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 ZMYM1Q5SVZ6 1142 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 CRACR2BQ8N4Y2 399 aaPredicted RBP13.51□□□□□ -0.25
ERCC8-208ENST00000497892 STRBPQ96SI9 672 aaKnown RBP13.51□□□□□ -0.25
ERCC8-208ENST00000497892 PICK1Q9NRD5 415 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 MCM9Q9NXL9 1143 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
ERCC8-208ENST00000497892 TESPA1A2RU30 521 aaPredicted RBP13.5□□□□□ -0.25
ERCC8-208ENST00000497892 NEFLP07196 543 aa13.5□□□□□ -0.25
ERCC8-208ENST00000497892 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
ERCC8-208ENST00000497892 CAP2P40123 477 aa13.5□□□□□ -0.25
ERCC8-208ENST00000497892 GTF2A2P52657 109 aa13.5□□□□□ -0.25
ERCC8-208ENST00000497892 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
ERCC8-208ENST00000497892 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
ERCC8-208ENST00000497892 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
ERCC8-208ENST00000497892 RNF186Q9NXI6 227 aa13.5□□□□□ -0.25
ERCC8-208ENST00000497892 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 IGF2BP3O00425 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
ERCC8-208ENST00000497892 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
ERCC8-208ENST00000497892 PTPRAP18433 802 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 GNAT2P19087 354 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 PLCD1P51178 756 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 GABPAQ06546 454 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 SNAPC2Q13487 334 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 TATDN1Q6P1N9 297 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 DDRGK1Q96HY6 314 aa13.49□□□□□ -0.25
ERCC8-208ENST00000497892 SEC62Q99442 399 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms