RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
HLA-B-254ENST00000497377 GJA5P36382 358 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 GTF2A2P52657 109 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 PPIL2Q13356 520 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 LCORLQ8N3X6 602 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
HLA-B-254ENST00000497377 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
HLA-B-254ENST00000497377 FSD1Q9BTV5 496 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 EHD4Q9H223 541 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 ARMT1Q9H993 441 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 PICK1Q9NRD5 415 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
HLA-B-254ENST00000497377 SAP30BPQ9UHR5 308 aaKnown RBP13.79□□□□□ -0.2
HLA-B-254ENST00000497377 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
HLA-B-254ENST00000497377 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
HLA-B-254ENST00000497377 TESPA1A2RU30 521 aaPredicted RBP13.78□□□□□ -0.2
HLA-B-254ENST00000497377 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
HLA-B-254ENST00000497377 PLEKHM2Q8IWE5 1019 aa13.78□□□□□ -0.2
HLA-B-254ENST00000497377 TBC1D2Q9BYX2 928 aa13.78□□□□□ -0.2
HLA-B-254ENST00000497377 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
HLA-B-254ENST00000497377 DCP1AQ9NPI6 582 aaPredicted RBP13.78□□□□□ -0.2
HLA-B-254ENST00000497377 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
HLA-B-254ENST00000497377 GINM1Q9NU53 330 aa13.78□□□□□ -0.2
HLA-B-254ENST00000497377 RNF186Q9NXI6 227 aa13.78□□□□□ -0.2
HLA-B-254ENST00000497377 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.21
HLA-B-254ENST00000497377 HSPA8P11142 646 aaKnown RBP13.77□□□□□ -0.21
HLA-B-254ENST00000497377 CETPP11597 493 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 GNAT2P19087 354 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 CAP2P40123 477 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 SNAPC2Q13487 334 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 SLFNL1Q499Z3 407 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 OSBP2Q969R2 916 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 MS4A4AQ96JQ5 239 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.21
HLA-B-254ENST00000497377 ATAD5Q96QE3 1844 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 CXCL11O14625 94 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 IRF6O14896 467 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 TRPA1O75762 1119 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 NEFLP07196 543 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 PTPRAP18433 802 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 GIMAP6Q6P9H5 292 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 SDR42E1Q8WUS8 393 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 STRBPQ96SI9 672 aaKnown RBP13.76□□□□□ -0.21
HLA-B-254ENST00000497377 CFHR5Q9BXR6 569 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 ZCCHC17Q9NP64 241 aaKnown RBP13.76□□□□□ -0.21
HLA-B-254ENST00000497377 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 KCNH4Q9UQ05 1017 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
HLA-B-254ENST00000497377 CCL15-CCL14A0A0B4J2E2 113 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 TRIM6-TRIM34B2RNG4 842 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 CHGBP05060 677 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 ASNSP08243 561 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 LBX1P52954 281 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 CCL15Q16663 113 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
HLA-B-254ENST00000497377 BAZ2AQ9UIF9 1905 aaKnown RBP13.74□□□□□ -0.21
HLA-B-254ENST00000497377 GPAA1O43292 621 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 PRKAB2O43741 272 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 SLURP2P0DP57 97 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 NOM1Q5C9Z4 860 aaKnown RBP13.74□□□□□ -0.21
HLA-B-254ENST00000497377 TATDN1Q6P1N9 297 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
HLA-B-254ENST00000497377 BRI3BPQ8WY22 251 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 SWAP70Q9UH65 585 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
HLA-B-254ENST00000497377 USP17L5A8MUK1 530 aa13.73□□□□□ -0.21
HLA-B-254ENST00000497377 IGF2BP3O00425 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
HLA-B-254ENST00000497377 PLCD1P51178 756 aa13.73□□□□□ -0.21
HLA-B-254ENST00000497377 GABPAQ06546 454 aa13.73□□□□□ -0.21
HLA-B-254ENST00000497377 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
HLA-B-254ENST00000497377 RILPL2Q969X0 211 aa13.73□□□□□ -0.21
HLA-B-254ENST00000497377 AS3MTQ9HBK9 375 aa13.73□□□□□ -0.21
HLA-B-254ENST00000497377 HELLSQ9NRZ9 838 aa13.73□□□□□ -0.21
HLA-B-254ENST00000497377 ARPP21Q9UBL0 812 aaPredicted RBP13.73□□□□□ -0.21
HLA-B-254ENST00000497377 GSG1L2A8MUP6 293 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 PATL2C9JE40 543 aaKnown RBP13.72□□□□□ -0.21
HLA-B-254ENST00000497377 USP17L12C9JPN9 530 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 USP17L21D6R901 530 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 M0R2C6 588 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 HIP1O00291 1037 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 PDE4AP27815 886 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 RRP1BQ14684 758 aaKnown RBP13.72□□□□□ -0.21
HLA-B-254ENST00000497377 SBK1Q52WX2 424 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
HLA-B-254ENST00000497377 PTPN18Q99952 460 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 WDR18Q9BV38 432 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 NACAP1Q9BZK3 213 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 PTPRFP10586 1907 aa13.72□□□□□ -0.21
HLA-B-254ENST00000497377 MYH8P13535 1937 aa13.71□□□□□ -0.21
HLA-B-254ENST00000497377 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
HLA-B-254ENST00000497377 CERKLQ49MI3 558 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms