RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 XAGE2Q96GT9 111 aa11.95□□□□□ -0.5
SCNM1-206ENST00000497147 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
SCNM1-206ENST00000497147 IGHDP01880 384 aa11.94□□□□□ -0.5
SCNM1-206ENST00000497147 CYP2B6P20813 491 aa11.94□□□□□ -0.5
SCNM1-206ENST00000497147 MAP3K10Q02779 954 aa11.94□□□□□ -0.5
SCNM1-206ENST00000497147 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
SCNM1-206ENST00000497147 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
SCNM1-206ENST00000497147 USP40Q9NVE5 1235 aa11.94□□□□□ -0.5
SCNM1-206ENST00000497147 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.94□□□□□ -0.5
SCNM1-206ENST00000497147 PTPRFP10586 1907 aa11.94□□□□□ -0.5
SCNM1-206ENST00000497147 PLXNB2O15031 1838 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 TNFRSF10AO00220 468 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 SMARCA5O60264 1052 aaPredicted RBP11.93□□□□□ -0.5
SCNM1-206ENST00000497147 PEX10O60683 326 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 CTNND1O60716 968 aaKnown RBP11.93□□□□□ -0.5
SCNM1-206ENST00000497147 ADORA1P30542 326 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 PLA2G5P39877 138 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 CACNB2Q08289 660 aaPredicted RBP11.93□□□□□ -0.5
SCNM1-206ENST00000497147 SHHQ15465 462 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 CCDC158Q5M9N0 1113 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 C9orf50Q5SZB4 431 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 B4GALNT3Q6L9W6 998 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 EAF2Q96CJ1 260 aaPredicted RBP11.93□□□□□ -0.5
SCNM1-206ENST00000497147 LBHD1Q9BQE6 289 aaPredicted RBP11.93□□□□□ -0.5
SCNM1-206ENST00000497147 CCDC8Q9H0W5 538 aaPredicted RBP11.93□□□□□ -0.5
SCNM1-206ENST00000497147 MYH13Q9UKX3 1938 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 PHIPQ8WWQ0 1821 aa11.93□□□□□ -0.5
SCNM1-206ENST00000497147 DDTLA6NHG4 134 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-206ENST00000497147 PRDX5P30044 214 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 CCND3P30281 292 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-206ENST00000497147 GCLCP48506 637 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-206ENST00000497147 RGS3P49796 1198 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 CCDC102BQ68D86 513 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 SMC5Q8IY18 1101 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 DBNDD2Q9BQY9 259 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 ASCC2Q9H1I8 757 aaPredicted RBP11.92□□□□□ -0.5
SCNM1-206ENST00000497147 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
SCNM1-206ENST00000497147 XRCC5P13010 732 aaKnown RBP11.91□□□□□ -0.5
SCNM1-206ENST00000497147 FOSL2P15408 326 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 PHKA1P46020 1223 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 TJAP1Q5JTD0 557 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
SCNM1-206ENST00000497147 WDR66Q8TBY9 1149 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 IDI2Q9BXS1 227 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 MORF4L1Q9UBU8 362 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 DBNLQ9UJU6 430 aaKnown RBP11.91□□□□□ -0.5
SCNM1-206ENST00000497147 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
SCNM1-206ENST00000497147 AK9Q5TCS8 1911 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 SEMA3EO15041 775 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 ENTPD3O75355 529 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 UQCRFS1P1P0C7P4 283 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 SPP2Q13103 211 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 CCL14Q16627 93 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 USP6NLQ92738 828 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 SENP6Q9GZR1 1112 aaPredicted RBP11.9□□□□□ -0.5
SCNM1-206ENST00000497147 DDX4Q9NQI0 724 aaKnown RBP11.9□□□□□ -0.5
SCNM1-206ENST00000497147 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
SCNM1-206ENST00000497147 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
SCNM1-206ENST00000497147 XIRP2A4UGR9 3374 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 ATN1P54259 1190 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-206ENST00000497147 HMGCS2P54868 508 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 SMAD3P84022 425 aaKnown RBP11.89□□□□□ -0.51
SCNM1-206ENST00000497147 NUCB1Q02818 461 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 CENPQQ7L2Z9 268 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-206ENST00000497147 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-206ENST00000497147 FAM122AQ96E09 287 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 LNPKQ9C0E8 428 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 TXNRD2Q9NNW7 524 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 DOCK1Q14185 1865 aa11.89□□□□□ -0.51
SCNM1-206ENST00000497147 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
SCNM1-206ENST00000497147 MAST2Q6P0Q8 1798 aa11.88□□□□□ -0.51
SCNM1-206ENST00000497147 FAM196BA6NMK8 535 aa11.88□□□□□ -0.51
SCNM1-206ENST00000497147 LDHBP07195 334 aaKnown RBP11.88□□□□□ -0.51
SCNM1-206ENST00000497147 ZKSCAN1P17029 563 aaPredicted RBP11.88□□□□□ -0.51
SCNM1-206ENST00000497147 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
SCNM1-206ENST00000497147 LTBP2Q14767 1821 aa11.88□□□□□ -0.51
SCNM1-206ENST00000497147 CHD9Q3L8U1 2897 aa11.88□□□□□ -0.51
SCNM1-206ENST00000497147 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 TMEM265A0A087WTH1 108 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-206ENST00000497147 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-206ENST00000497147 RTP1P59025 263 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 RRP1BQ14684 758 aaKnown RBP11.87□□□□□ -0.51
SCNM1-206ENST00000497147 MORN1Q5T089 497 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 POTEEQ6S8J3 1075 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 ZNF280CQ8ND82 737 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 SOCS4Q8WXH5 440 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 ZNF512BQ96KM6 892 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-206ENST00000497147 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
SCNM1-206ENST00000497147 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
SCNM1-206ENST00000497147 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms