RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PMEPA1Q969W9 287 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 DPH2Q9BQC3 489 aaPredicted RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 GNL3LQ9NVN8 582 aaKnown RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 FBXO9Q9UK97 447 aaPredicted RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 DCDC2CA8MYV0 355 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 C9orf172C9J069 976 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 K7ELQ4 463 aaPredicted RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 CTAGE5O15320 804 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 ZNF862O60290 1169 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 ZNF853P0CG23 659 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 RXRBP28702 533 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 ADMP35318 185 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 CD151P48509 253 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 SEPT6Q14141 434 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 INPP5AQ14642 412 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 ZC3H12AQ5D1E8 599 aaKnown RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 FBXO33Q7Z6M2 555 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 PDZD3Q86UT5 571 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 CORO1BQ9BR76 489 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 WDR18Q9BV38 432 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 LNPKQ9C0E8 428 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 RANBP17Q9H2T7 1088 aaKnown RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 SEMA6CQ9H3T2 930 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 PUF60Q9UHX1 559 aaKnown RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 CTDP1Q9Y5B0 961 aaPredicted RBP3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 PCDHB5Q9Y5E4 795 aa3.76□□□□□ -1.81
SNRNP48-202ENST00000496946 PIK3R2O00459 728 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 PES1O00541 588 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 PPP1R12AO14974 1030 aaPredicted RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 HMGN5P82970 282 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 BIRC2Q13490 618 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 POU4F3Q15319 338 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 CCDC184Q52MB2 194 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 EAPPQ56P03 285 aaPredicted RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 ICE2Q659A1 982 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 C11orf96Q7Z7L8 435 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 DTWD1Q8N5C7 304 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 CITED4Q96RK1 184 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 TMPRSS13Q9BYE2 586 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 RRAGDQ9NQL2 400 aaPredicted RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 NRBP1Q9UHY1 535 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 TTF2Q9UNY4 1162 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 KDM6BO15054 1643 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 CCDC189A1A4V9 331 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 CFAP69A5D8W1 941 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 KIF1CO43896 1103 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 ADH5P11766 374 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 HOXA10P31260 410 aaPredicted RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 NAP1L1P55209 391 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 PSMC1P62191 440 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 CCDC85BQ15834 202 aaPredicted RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 CT47A1Q5JQC4 288 aaPredicted RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 PPM1JQ5JR12 505 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 PRR23CQ6ZRP0 262 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 BEND4Q6ZU67 534 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 NOP9Q86U38 636 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 SULF2Q8IWU5 870 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 PNISRQ8TF01 805 aaKnown RBP3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 MYRFLQ96LU7 910 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 ARPC5LQ9BPX5 153 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 TANGO6Q9C0B7 1094 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 DNAJC25Q9H1X3 360 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 COPRSQ9NQ92 184 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 KIF16BQ96L93 1317 aa3.75□□□□□ -1.81
SNRNP48-202ENST00000496946 TLDC2A0PJX2 215 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 PRAMEF27A3QJZ7 478 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 FAM170BA6NMN3 283 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 ADAMTS4O75173 837 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 IPO7O95373 1038 aaKnown RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 PAX7P23759 505 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 ERCC5P28715 1186 aaPredicted RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 FLT3P36888 993 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 CD96P40200 585 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 FAM160A1Q05DH4 1040 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 TTLL4Q14679 1199 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 L1TD1Q5T7N2 865 aaKnown RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 C9orf131Q5VYM1 1079 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 FAM181AQ8N9Y4 354 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 C2CD4AQ8NCU7 369 aaPredicted RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 LSM14AQ8ND56 463 aaKnown RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 GPBAR1Q8TDU6 330 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 XAGE3Q8WTP9 111 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 ACSBG1Q96GR2 724 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 NCAPGQ9BPX3 1015 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 SENP7Q9BQF6 1050 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 RNF208Q9H0X6 261 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 C7orf69Q9H7B7 122 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 PCDHGB7Q9Y5F8 929 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 ZSCAN20P17040 1043 aaPredicted RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 NAT1P18440 290 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 GNA15P30679 374 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 HDLBPQ00341 1268 aaKnown RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 POU5F1Q01860 360 aaKnown RBP3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 TSNAXIP1Q2TAA8 658 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 C4orf46Q504U0 113 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 PCNX4Q63HM2 1172 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 EGFLAMQ63HQ2 1017 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 ZNF765Q7L2R6 523 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 TMEM130Q8N3G9 435 aa3.74□□□□□ -1.81
SNRNP48-202ENST00000496946 RAD18Q9NS91 495 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms