RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.49	□□□□□ -0.73
TARDBP-210	ENST00000496840	TP53INP2	Q8IXH6	220 aa		10.49	□□□□□ -0.73
TARDBP-210	ENST00000496840	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.49	□□□□□ -0.73
TARDBP-210	ENST00000496840	ADGRE2	Q9UHX3	823 aa		10.49	□□□□□ -0.73
TARDBP-210	ENST00000496840	SNX11	Q9Y5W9	270 aa		10.49	□□□□□ -0.73
TARDBP-210	ENST00000496840	C22orf34	Q6ZV56	151 aa		10.48	□□□□□ -0.73
TARDBP-210	ENST00000496840	TJP2	Q9UDY2	1190 aa		10.48	□□□□□ -0.73
TARDBP-210	ENST00000496840		F6X3S4	739 aa		10.47	□□□□□ -0.73
TARDBP-210	ENST00000496840	BPNT1	O95861	308 aa		10.47	□□□□□ -0.73
TARDBP-210	ENST00000496840	F13A1	P00488	732 aa		10.47	□□□□□ -0.73
TARDBP-210	ENST00000496840	PRAMEF13	Q5VWM6	474 aa		10.47	□□□□□ -0.73
TARDBP-210	ENST00000496840	SLC6A19	Q695T7	634 aa		10.47	□□□□□ -0.73
TARDBP-210	ENST00000496840	HRASLS5	Q96KN8	279 aa		10.47	□□□□□ -0.73
TARDBP-210	ENST00000496840	MIPEP	Q99797	713 aa		10.47	□□□□□ -0.73
TARDBP-210	ENST00000496840	KRTAP4-8	A0A0G2JLE6	195 aa		10.46	□□□□□ -0.73
TARDBP-210	ENST00000496840	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.46	□□□□□ -0.73
TARDBP-210	ENST00000496840	LETMD1	Q6P1Q0	360 aa		10.46	□□□□□ -0.73
TARDBP-210	ENST00000496840	TMEM87B	Q96K49	555 aa		10.46	□□□□□ -0.73
TARDBP-210	ENST00000496840	KCNQ5	Q9NR82	932 aa		10.46	□□□□□ -0.73
TARDBP-210	ENST00000496840	KBTBD4	Q9NVX7	518 aa		10.46	□□□□□ -0.73
TARDBP-210	ENST00000496840	GNAT3	A8MTJ3	354 aa		10.45	□□□□□ -0.74
TARDBP-210	ENST00000496840	ITIH2	P19823	946 aa		10.45	□□□□□ -0.74
TARDBP-210	ENST00000496840	GART	P22102	1010 aa		10.45	□□□□□ -0.74
TARDBP-210	ENST00000496840	CBLL1	Q75N03	491 aa		10.45	□□□□□ -0.74
TARDBP-210	ENST00000496840	SPRED2	Q7Z698	418 aa		10.45	□□□□□ -0.74
TARDBP-210	ENST00000496840	MCAT	Q8IVS2	390 aa	Known RBP	10.45	□□□□□ -0.74
TARDBP-210	ENST00000496840	SPACA3	Q8IXA5	215 aa		10.45	□□□□□ -0.74
TARDBP-210	ENST00000496840	PRR36	Q9H6K5	1346 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	BNIP3	Q12983	259 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	MPP2	Q14168	576 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	AOC3	Q16853	763 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	NKPD1	Q17RQ9	610 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	TMEM201	Q5SNT2	666 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	SNAP47	Q5SQN1	464 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	ACSF2	Q96CM8	615 aa	Predicted RBP	10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	COX4I2	Q96KJ9	171 aa		10.44	□□□□□ -0.74
TARDBP-210	ENST00000496840	MINDY4B	A8MYZ0	360 aa		10.43	□□□□□ -0.74
TARDBP-210	ENST00000496840	CLCN7	P51798	805 aa		10.43	□□□□□ -0.74
TARDBP-210	ENST00000496840	SFRP5	Q5T4F7	317 aa		10.43	□□□□□ -0.74
TARDBP-210	ENST00000496840	HS2ST1	Q7LGA3	356 aa		10.43	□□□□□ -0.74
TARDBP-210	ENST00000496840	GOLM1	Q8NBJ4	401 aa		10.43	□□□□□ -0.74
TARDBP-210	ENST00000496840	COPRS	Q9NQ92	184 aa		10.43	□□□□□ -0.74
TARDBP-210	ENST00000496840	TPX2	Q9ULW0	747 aa	Known RBP	10.43	□□□□□ -0.74
TARDBP-210	ENST00000496840	RBM47	A0AV96	593 aa	Known RBP	10.42	□□□□□ -0.74
TARDBP-210	ENST00000496840	CD8B	P10966	210 aa		10.42	□□□□□ -0.74
TARDBP-210	ENST00000496840	TAL1	P17542	331 aa	Predicted RBP	10.42	□□□□□ -0.74
TARDBP-210	ENST00000496840	FAM160A1	Q05DH4	1040 aa		10.42	□□□□□ -0.74
TARDBP-210	ENST00000496840	FAM196A	Q6ZSG2	479 aa		10.42	□□□□□ -0.74
TARDBP-210	ENST00000496840	RIN3	Q8TB24	985 aa		10.42	□□□□□ -0.74
TARDBP-210	ENST00000496840	CORIN	Q9Y5Q5	1042 aa		10.42	□□□□□ -0.74
TARDBP-210	ENST00000496840	ROBO2	Q9HCK4	1378 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	PLCG1	P19174	1290 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	FUT4	P22083	530 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	LDLRAD1	Q5T700	205 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	KRTAP19-1	Q8IUB9	90 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	ASB11	Q8WXH4	323 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	LRRC3	Q9BY71	257 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	GGT7	Q9UJ14	662 aa		10.41	□□□□□ -0.74
TARDBP-210	ENST00000496840	CNTNAP4	Q9C0A0	1308 aa		10.4	□□□□□ -0.74
TARDBP-210	ENST00000496840	CYP7A1	P22680	504 aa		10.4	□□□□□ -0.74
TARDBP-210	ENST00000496840	EIF4A3	P38919	411 aa	Known RBP	10.4	□□□□□ -0.74
TARDBP-210	ENST00000496840	REC114	Q7Z4M0	266 aa		10.4	□□□□□ -0.74
TARDBP-210	ENST00000496840	MFSD4A	Q8N468	514 aa		10.4	□□□□□ -0.74
TARDBP-210	ENST00000496840	XAGE3	Q8WTP9	111 aa		10.4	□□□□□ -0.74
TARDBP-210	ENST00000496840	DPH2	Q9BQC3	489 aa	Predicted RBP	10.4	□□□□□ -0.74
TARDBP-210	ENST00000496840	GREM1	O60565	184 aa		10.39	□□□□□ -0.75
TARDBP-210	ENST00000496840	PLCL1	Q15111	1095 aa		10.39	□□□□□ -0.75
TARDBP-210	ENST00000496840	FBXL19	Q6PCT2	694 aa		10.39	□□□□□ -0.75
TARDBP-210	ENST00000496840	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.39	□□□□□ -0.75
TARDBP-210	ENST00000496840	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.39	□□□□□ -0.75
TARDBP-210	ENST00000496840	PITPNM2	Q9BZ72	1349 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	BTBD11	A6QL63	1104 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	ETV3	P41162	512 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	KIR3DL1	P43629	444 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	YARS	P54577	528 aa	Known RBP	10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	ANGEL2	Q5VTE6	544 aa	Known RBP	10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	SLFN12	Q8IYM2	578 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	TMEM87A	Q8NBN3	555 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	DNAJB8	Q8NHS0	232 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	CYB5D2	Q8WUJ1	264 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	CAPN6	Q9Y6Q1	641 aa		10.38	□□□□□ -0.75
TARDBP-210	ENST00000496840	PRR33	A8MZF0	331 aa		10.37	□□□□□ -0.75
TARDBP-210	ENST00000496840	CD96	P40200	585 aa		10.37	□□□□□ -0.75
TARDBP-210	ENST00000496840	CDH24	Q86UP0	819 aa		10.37	□□□□□ -0.75
TARDBP-210	ENST00000496840	FAM13C	Q8NE31	585 aa		10.37	□□□□□ -0.75
TARDBP-210	ENST00000496840	FBXO27	Q8NI29	283 aa		10.37	□□□□□ -0.75
TARDBP-210	ENST00000496840	REV1	Q9UBZ9	1251 aa		10.37	□□□□□ -0.75
TARDBP-210	ENST00000496840	CEP131	Q9UPN4	1083 aa		10.37	□□□□□ -0.75
TARDBP-210	ENST00000496840	FAM155A	B1AL88	458 aa	Predicted RBP	10.36	□□□□□ -0.75
TARDBP-210	ENST00000496840	HTR3B	O95264	441 aa		10.36	□□□□□ -0.75
TARDBP-210	ENST00000496840	TRIM26	Q12899	539 aa	Predicted RBP	10.36	□□□□□ -0.75
TARDBP-210	ENST00000496840	CWF19L2	Q2TBE0	894 aa	Known RBP	10.36	□□□□□ -0.75
TARDBP-210	ENST00000496840	ZNF792	Q3KQV3	632 aa		10.36	□□□□□ -0.75
TARDBP-210	ENST00000496840	ITGB5	P18084	799 aa		10.35	□□□□□ -0.75
TARDBP-210	ENST00000496840	PPP1R13L	Q8WUF5	828 aa		10.35	□□□□□ -0.75
TARDBP-210	ENST00000496840	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.35	□□□□□ -0.75
TARDBP-210	ENST00000496840	BACH2	Q9BYV9	841 aa		10.35	□□□□□ -0.75
TARDBP-210	ENST00000496840	METTL5	Q9NRN9	209 aa	Known RBP	10.35	□□□□□ -0.75

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