RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 ADGRA2Q96PE1 1338 aa17.47■□□□□ 0.39
PDAP1-204ENST00000496335 CYP2D6P10635 497 aa17.46■□□□□ 0.39
PDAP1-204ENST00000496335 MX1P20591 662 aa17.46■□□□□ 0.39
PDAP1-204ENST00000496335 HMGCS2P54868 508 aa17.46■□□□□ 0.39
PDAP1-204ENST00000496335 AAMPQ13685 434 aa17.46■□□□□ 0.39
PDAP1-204ENST00000496335 TREML2Q5T2D2 321 aa17.46■□□□□ 0.39
PDAP1-204ENST00000496335 PARK7Q99497 189 aaKnown RBP17.46■□□□□ 0.39
PDAP1-204ENST00000496335 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
PDAP1-204ENST00000496335 HTTP42858 3142 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 ERC2O15083 957 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 GH2P01242 217 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 SHMT1P34896 483 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 WDR18Q9BV38 432 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 AS3MTQ9HBK9 375 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 AGTPBP1Q9UPW5 1226 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 PTPN22Q9Y2R2 807 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 LOC285556D6RIA3 1793 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 SALL3Q9BXA9 1300 aa17.45■□□□□ 0.38
PDAP1-204ENST00000496335 SMIM22K7EJ46 135 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 GLRX3O76003 335 aaKnown RBP17.44■□□□□ 0.38
PDAP1-204ENST00000496335 IGHDP01880 384 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 LACTBP83111 547 aaPredicted RBP17.44■□□□□ 0.38
PDAP1-204ENST00000496335 GABPAQ06546 454 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 MTMR2Q13614 643 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 CERKLQ49MI3 558 aaPredicted RBP17.44■□□□□ 0.38
PDAP1-204ENST00000496335 PROCA1Q8NCQ7 364 aaPredicted RBP17.44■□□□□ 0.38
PDAP1-204ENST00000496335 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
PDAP1-204ENST00000496335 ATP8A2Q9NTI2 1148 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 GINM1Q9NU53 330 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 SLC45A1Q9Y2W3 748 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
PDAP1-204ENST00000496335 CYP2D7A0A087X1C5 515 aa17.43■□□□□ 0.38
PDAP1-204ENST00000496335 RNF113AO15541 343 aaKnown RBP17.43■□□□□ 0.38
PDAP1-204ENST00000496335 CTGFP29279 349 aa17.43■□□□□ 0.38
PDAP1-204ENST00000496335 BACE1P56817 501 aa17.43■□□□□ 0.38
PDAP1-204ENST00000496335 IRX6P78412 446 aaPredicted RBP17.43■□□□□ 0.38
PDAP1-204ENST00000496335 SH3D19Q5HYK7 790 aa17.43■□□□□ 0.38
PDAP1-204ENST00000496335 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
PDAP1-204ENST00000496335 DYNLL2Q96FJ2 89 aa17.43■□□□□ 0.38
PDAP1-204ENST00000496335 MYH8P13535 1937 aa17.43■□□□□ 0.38
PDAP1-204ENST00000496335 BCRP11274 1271 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 SOX10P56693 466 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 KIF22Q14807 665 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 RAB3GAP1Q15042 981 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 ARHGEF6Q15052 776 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 APPBP2Q92624 585 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 STRBPQ96SI9 672 aaKnown RBP17.42■□□□□ 0.38
PDAP1-204ENST00000496335 CENPFP49454 3210 aa17.42■□□□□ 0.38
PDAP1-204ENST00000496335 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 USP17L21D6R901 530 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 ZFYP08048 801 aaPredicted RBP17.41■□□□□ 0.38
PDAP1-204ENST00000496335 PSMC4P43686 418 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 C12orf60Q5U649 245 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 SMC5Q8IY18 1101 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 SMCR8Q8TEV9 937 aaPredicted RBP17.41■□□□□ 0.38
PDAP1-204ENST00000496335 TRIM47Q96LD4 638 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 LNPKQ9C0E8 428 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 MGAMO43451 1857 aa17.41■□□□□ 0.38
PDAP1-204ENST00000496335 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 M0R2C6 588 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 PDE1AP54750 535 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 STAP2Q9UGK3 403 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 DOCK3Q8IZD9 2030 aa17.4■□□□□ 0.38
PDAP1-204ENST00000496335 GSG1L2A8MUP6 293 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 MPHOSPH10O00566 681 aaKnown RBP17.39■□□□□ 0.37
PDAP1-204ENST00000496335 GPAA1O43292 621 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 SEPT2Q15019 361 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 ZYXQ15942 572 aaKnown RBP17.39■□□□□ 0.37
PDAP1-204ENST00000496335 CTR9Q6PD62 1173 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 DDRGK1Q96HY6 314 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 SEC62Q99442 399 aaKnown RBP17.39■□□□□ 0.37
PDAP1-204ENST00000496335 ASCC2Q9H1I8 757 aaPredicted RBP17.39■□□□□ 0.37
PDAP1-204ENST00000496335 EMILIN3Q9NT22 766 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 PNMA3Q9UL41 463 aa17.39■□□□□ 0.37
PDAP1-204ENST00000496335 KIAA0100Q14667 2235 aaKnown RBP17.39■□□□□ 0.37
PDAP1-204ENST00000496335 FMNL1O95466 1100 aaPredicted RBP17.38■□□□□ 0.37
PDAP1-204ENST00000496335 OSBPP22059 807 aa17.38■□□□□ 0.37
PDAP1-204ENST00000496335 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.376e-17■■■■□ 22.7
PDAP1-204ENST00000496335 ANKRD13CQ8N6S4 541 aa17.38■□□□□ 0.37
PDAP1-204ENST00000496335 FEZ1Q99689 392 aa17.38■□□□□ 0.37
PDAP1-204ENST00000496335 SWAP70Q9UH65 585 aa17.38■□□□□ 0.37
PDAP1-204ENST00000496335 CDK8P49336 464 aa17.37■□□□□ 0.37
PDAP1-204ENST00000496335 RGS19P49795 217 aa17.37■□□□□ 0.37
PDAP1-204ENST00000496335 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
PDAP1-204ENST00000496335 USP17L2Q6R6M4 530 aa17.37■□□□□ 0.37
PDAP1-204ENST00000496335 AMOTL1Q8IY63 956 aa17.37■□□□□ 0.37
PDAP1-204ENST00000496335 P2RX7Q99572 595 aaKnown RBP17.37■□□□□ 0.37
PDAP1-204ENST00000496335 GNRH1P01148 92 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms