RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 CAP2P40123 477 aa8.85□□□□□ -0.99
UBP1-213ENST00000496310 FAM109BQ6ICB4 259 aaPredicted RBP8.85□□□□□ -0.99
UBP1-213ENST00000496310 PI16Q6UXB8 463 aa8.85□□□□□ -0.99
UBP1-213ENST00000496310 GPR142Q7Z601 462 aa8.85□□□□□ -0.99
UBP1-213ENST00000496310 GPRC5AQ8NFJ5 357 aa8.85□□□□□ -0.99
UBP1-213ENST00000496310 OSBPL5Q9H0X9 879 aaPredicted RBP8.85□□□□□ -0.99
UBP1-213ENST00000496310 PRDM5Q9NQX1 630 aaPredicted RBP8.85□□□□□ -0.99
UBP1-213ENST00000496310 MORF4L1Q9UBU8 362 aa8.85□□□□□ -0.99
UBP1-213ENST00000496310 ATP11BQ9Y2G3 1177 aa8.85□□□□□ -0.99
UBP1-213ENST00000496310 GPR75-ASB3A0A0A6YYF3 556 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 TBC1D12O60347 775 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 GDF11O95390 407 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 RTP1P59025 263 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 HERVK_113P62684 666 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 PABPC4Q13310 644 aaKnown RBP eCLIP8.84□□□□□ -0.99
UBP1-213ENST00000496310 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
UBP1-213ENST00000496310 MORN1Q5T089 497 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 GJC2Q5T442 439 aaPredicted RBP8.84□□□□□ -0.99
UBP1-213ENST00000496310 WDR78Q5VTH9 848 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 ERICH6Q7L0X2 663 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 SH3RF1Q7Z6J0 888 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 CCAR1Q8IX12 1150 aaKnown RBP8.84□□□□□ -0.99
UBP1-213ENST00000496310 USP38Q8NB14 1042 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 SH3RF3Q8TEJ3 882 aaPredicted RBP8.84□□□□□ -0.99
UBP1-213ENST00000496310 USP6NLQ92738 828 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 BADQ92934 168 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 TMOD4Q9NZQ9 345 aa8.84□□□□□ -0.99
UBP1-213ENST00000496310 COL11A1P12107 1806 aaPredicted RBP8.84□□□□□ -0.99
UBP1-213ENST00000496310 XRCC5P13010 732 aaKnown RBP8.83□□□□□ -1
UBP1-213ENST00000496310 FOSL2P15408 326 aa8.83□□□□□ -1
UBP1-213ENST00000496310 CYP2C19P33261 490 aa8.83□□□□□ -1
UBP1-213ENST00000496310 RGS2P41220 211 aa8.83□□□□□ -1
UBP1-213ENST00000496310 BACE1P56817 501 aa8.83□□□□□ -1
UBP1-213ENST00000496310 ERVK-9P63128 1117 aa8.83□□□□□ -1
UBP1-213ENST00000496310 ERVK-24P63145 666 aa8.83□□□□□ -1
UBP1-213ENST00000496310 PDE3AQ14432 1141 aa8.83□□□□□ -1
UBP1-213ENST00000496310 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
UBP1-213ENST00000496310 PLEKHH3Q7Z736 793 aa8.83□□□□□ -1
UBP1-213ENST00000496310 TRPV1Q8NER1 839 aa8.83□□□□□ -1
UBP1-213ENST00000496310 NPLOC4Q8TAT6 608 aa8.83□□□□□ -1
UBP1-213ENST00000496310 PPM1EQ8WY54 764 aa8.83□□□□□ -1
UBP1-213ENST00000496310 XAGE2Q96GT9 111 aa8.83□□□□□ -1
UBP1-213ENST00000496310 CWC22Q9HCG8 908 aaKnown RBP8.83□□□□□ -1
UBP1-213ENST00000496310 MRS2Q9HD23 443 aa8.83□□□□□ -1
UBP1-213ENST00000496310 SAP30BPQ9UHR5 308 aaKnown RBP8.83□□□□□ -1
UBP1-213ENST00000496310 MCM3APO60318 1980 aa8.82□□□□□ -1
UBP1-213ENST00000496310 MYH8P13535 1937 aa8.82□□□□□ -1
UBP1-213ENST00000496310 SEMA3EO15041 775 aa8.82□□□□□ -1
UBP1-213ENST00000496310 CNMDO75829 334 aa8.82□□□□□ -1
UBP1-213ENST00000496310 TRIM60Q495X7 471 aa8.82□□□□□ -1
UBP1-213ENST00000496310 MAPKAPK5Q8IW41 473 aa8.82□□□□□ -1
UBP1-213ENST00000496310 TEX11Q8IYF3 940 aa8.82□□□□□ -1
UBP1-213ENST00000496310 ZGPATQ8N5A5 531 aaKnown RBP8.82□□□□□ -1
UBP1-213ENST00000496310 SOCS4Q8WXH5 440 aa8.82□□□□□ -1
UBP1-213ENST00000496310 SSH1Q8WYL5 1049 aa8.82□□□□□ -1
UBP1-213ENST00000496310 FERMT2Q96AC1 680 aa8.82□□□□□ -1
UBP1-213ENST00000496310 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
UBP1-213ENST00000496310 NEUROD6Q96NK8 337 aa8.82□□□□□ -1
UBP1-213ENST00000496310 DNAJC18Q9H819 358 aa8.82□□□□□ -1
UBP1-213ENST00000496310 AS3MTQ9HBK9 375 aa8.82□□□□□ -1
UBP1-213ENST00000496310 EMILIN3Q9NT22 766 aa8.82□□□□□ -1
UBP1-213ENST00000496310 RAI14Q9P0K7 980 aa8.82□□□□□ -1
UBP1-213ENST00000496310 PRKAG2Q9UGJ0 569 aa8.82□□□□□ -1
UBP1-213ENST00000496310 DDX20Q9UHI6 824 aaKnown RBP8.82□□□□□ -1
UBP1-213ENST00000496310 NCOR1O75376 2440 aa8.82□□□□□ -1
UBP1-213ENST00000496310 A0A1B0GUL7 405 aa8.81□□□□□ -1
UBP1-213ENST00000496310 TRIM43BA6NCK2 446 aa8.81□□□□□ -1
UBP1-213ENST00000496310 CIAO1O76071 339 aa8.81□□□□□ -1
UBP1-213ENST00000496310 ITGB8P26012 769 aa8.81□□□□□ -1
UBP1-213ENST00000496310 MAPK4P31152 587 aa8.81□□□□□ -1
UBP1-213ENST00000496310 HOXA7P31268 230 aaPredicted RBP8.81□□□□□ -1
UBP1-213ENST00000496310 EPHB4P54760 987 aa8.81□□□□□ -1
UBP1-213ENST00000496310 TFCP2Q12800 502 aa8.81□□□□□ -1
UBP1-213ENST00000496310 MAP2K5Q13163 448 aa8.81□□□□□ -1
UBP1-213ENST00000496310 PRAMEF19Q5SWL8 479 aa8.81□□□□□ -1
UBP1-213ENST00000496310 SLF2Q8IX21 1173 aa8.81□□□□□ -1
UBP1-213ENST00000496310 TGFBRAP1Q8WUH2 860 aa8.81□□□□□ -1
UBP1-213ENST00000496310 TRIM43Q96BQ3 446 aaPredicted RBP8.81□□□□□ -1
UBP1-213ENST00000496310 NSUN4Q96CB9 384 aaKnown RBP8.81□□□□□ -1
UBP1-213ENST00000496310 EDC3Q96F86 508 aaKnown RBP8.81□□□□□ -1
UBP1-213ENST00000496310 APBA2Q99767 749 aa8.81□□□□□ -1
UBP1-213ENST00000496310 WDR18Q9BV38 432 aa8.81□□□□□ -1
UBP1-213ENST00000496310 AATFQ9NY61 560 aaKnown RBP eCLIP8.81□□□□□ -1
UBP1-213ENST00000496310 HMG20BQ9P0W2 317 aa8.81□□□□□ -1
UBP1-213ENST00000496310 PALD1Q9ULE6 856 aa8.81□□□□□ -1
UBP1-213ENST00000496310 PARP14Q460N5 1801 aa8.8□□□□□ -1
UBP1-213ENST00000496310 USP17L10C9JJH3 530 aa8.8□□□□□ -1
UBP1-213ENST00000496310 IL15P40933 162 aaPredicted RBP8.8□□□□□ -1
UBP1-213ENST00000496310 ATP2B2Q01814 1243 aa8.8□□□□□ -1
UBP1-213ENST00000496310 GRIN2CQ14957 1233 aa8.8□□□□□ -1
UBP1-213ENST00000496310 MFSD14CQ5VZR4 134 aa8.8□□□□□ -1
UBP1-213ENST00000496310 SPTY2D1Q68D10 685 aaPredicted RBP8.8□□□□□ -1
UBP1-213ENST00000496310 SLC39A5Q6ZMH5 540 aa8.8□□□□□ -1
UBP1-213ENST00000496310 FAM9BQ8IZU0 186 aa8.8□□□□□ -1
UBP1-213ENST00000496310 SNRKQ9NRH2 765 aa8.8□□□□□ -1
UBP1-213ENST00000496310 BTBD7Q9P203 1132 aa8.8□□□□□ -1
UBP1-213ENST00000496310 PI4KBQ9UBF8 816 aa8.8□□□□□ -1
UBP1-213ENST00000496310 TMEM265A0A087WTH1 108 aa8.79□□□□□ -1
UBP1-213ENST00000496310 C19orf81C9J6K1 198 aa8.79□□□□□ -1
UBP1-213ENST00000496310 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms