RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 TCP10Q12799 353 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 AKNAD1Q5T1N1 836 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 C12orf60Q5U649 245 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 MFSD6Q6ZSS7 791 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 KRT26Q7Z3Y9 468 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 FAM83AQ86UY5 434 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 RASEFQ8IZ41 740 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 NCOA7Q8NI08 942 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 STAG1Q8WVM7 1258 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 TM6SF1Q9BZW5 370 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 KRT23Q9C075 422 aa17.73■□□□□ 0.43
GAPDH-210ENST00000496049 DDX4Q9NQI0 724 aaKnown RBP17.73■□□□□ 0.43
GAPDH-210ENST00000496049 COL6A3P12111 3177 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 ATRNL1Q5VV63 1379 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 E7EWF7 191 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 ST18O60284 1047 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
GAPDH-210ENST00000496049 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 TBC1D10CQ8IV04 446 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 FAM151AQ8WW52 585 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 FAM198AQ9UFP1 575 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 CYP46A1Q9Y6A2 500 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 MYH8P13535 1937 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 PITPNM2Q9BZ72 1349 aa17.72■□□□□ 0.43
GAPDH-210ENST00000496049 EGFRP00533 1210 aa17.71■□□□□ 0.43
GAPDH-210ENST00000496049 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
GAPDH-210ENST00000496049 SLC4A8Q2Y0W8 1093 aa17.71■□□□□ 0.43
GAPDH-210ENST00000496049 RASAL3Q86YV0 1011 aa17.71■□□□□ 0.43
GAPDH-210ENST00000496049 CRACR2BQ8N4Y2 399 aaPredicted RBP17.71■□□□□ 0.43
GAPDH-210ENST00000496049 GGA3Q9NZ52 723 aa17.71■□□□□ 0.43
GAPDH-210ENST00000496049 CYP2D7A0A087X1C5 515 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 CYP2D6P10635 497 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 ANGEL2Q5VTE6 544 aaKnown RBP17.7■□□□□ 0.42
GAPDH-210ENST00000496049 ESR2Q92731 530 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 EHD4Q9H223 541 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 PI4KBQ9UBF8 816 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 SWAP70Q9UH65 585 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 SERPINB13Q9UIV8 391 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 PPP2R3BQ9Y5P8 575 aa17.7■□□□□ 0.42
GAPDH-210ENST00000496049 CENPFP49454 3210 aa17.69■□□□□ 0.42
GAPDH-210ENST00000496049 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
GAPDH-210ENST00000496049 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
GAPDH-210ENST00000496049 HOOK2Q96ED9 719 aa17.69■□□□□ 0.42
GAPDH-210ENST00000496049 KIF2CQ99661 725 aa17.69■□□□□ 0.42
GAPDH-210ENST00000496049 NBPF3Q9H094 633 aa17.69■□□□□ 0.42
GAPDH-210ENST00000496049 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
GAPDH-210ENST00000496049 NEDD4P46934 1319 aa17.69■□□□□ 0.42
GAPDH-210ENST00000496049 GPR25O00155 361 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 ORC4O43929 436 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 MCM5P33992 734 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 PLCD1P51178 756 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 FGD1P98174 961 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 ADCK5Q3MIX3 580 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 C16orf86Q6ZW13 317 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 RUFY3Q7L099 469 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 STK11IPQ8N1F8 1099 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 UPF3BQ9BZI7 483 aaKnown RBP17.68■□□□□ 0.42
GAPDH-210ENST00000496049 ZSWIM6Q9HCJ5 1215 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
GAPDH-210ENST00000496049 TAF6LQ9Y6J9 622 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
GAPDH-210ENST00000496049 RPS6KB1P23443 525 aa17.67■□□□□ 0.42
GAPDH-210ENST00000496049 NEK4P51957 841 aa17.67■□□□□ 0.42
GAPDH-210ENST00000496049 RASA3Q14644 834 aa17.67■□□□□ 0.42
GAPDH-210ENST00000496049 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
GAPDH-210ENST00000496049 DHX32Q7L7V1 743 aaKnown RBP17.67■□□□□ 0.42
GAPDH-210ENST00000496049 SULF1Q8IWU6 871 aa17.67■□□□□ 0.42
GAPDH-210ENST00000496049 HERC5Q9UII4 1024 aaKnown RBP17.67■□□□□ 0.42
GAPDH-210ENST00000496049 SIPA1L1O43166 1804 aa17.67■□□□□ 0.42
GAPDH-210ENST00000496049 DDTLA6NHG4 134 aaPredicted RBP17.66■□□□□ 0.42
GAPDH-210ENST00000496049 B4E1Z4 1266 aa17.66■□□□□ 0.42
GAPDH-210ENST00000496049 RANBP6O60518 1105 aaKnown RBP17.66■□□□□ 0.42
GAPDH-210ENST00000496049 EN2P19622 333 aaPredicted RBP17.66■□□□□ 0.42
GAPDH-210ENST00000496049 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
GAPDH-210ENST00000496049 FOXP4Q8IVH2 680 aaPredicted RBP17.66■□□□□ 0.42
GAPDH-210ENST00000496049 ZFPM1Q8IX07 1006 aa17.66■□□□□ 0.42
GAPDH-210ENST00000496049 REM2Q8IYK8 340 aaPredicted RBP17.66■□□□□ 0.42
GAPDH-210ENST00000496049 TMEM39BQ9GZU3 492 aa17.66■□□□□ 0.42
GAPDH-210ENST00000496049 DEFB129Q9H1M3 183 aa17.66■□□□□ 0.42
GAPDH-210ENST00000496049 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
GAPDH-210ENST00000496049 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
GAPDH-210ENST00000496049 ERICH2A1L162 156 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 KDM4AO75164 1064 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 FGRP09769 529 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 CDK8P49336 464 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 MCM2P49736 904 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 BECN1Q14457 450 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 IQCA1Q86XH1 822 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
GAPDH-210ENST00000496049 ZNF444Q8N0Y2 327 aaPredicted RBP17.65■□□□□ 0.42
GAPDH-210ENST00000496049 DYNLL2Q96FJ2 89 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 UBAC1Q9BSL1 405 aa17.65■□□□□ 0.42
GAPDH-210ENST00000496049 ASTN2O75129 1339 aaPredicted RBP17.65■□□□□ 0.42
GAPDH-210ENST00000496049 BRCA2P51587 3418 aa17.64■□□□□ 0.41
GAPDH-210ENST00000496049 PRC1O43663 620 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms