RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 NEFLP07196 543 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 PHKG2P15735 406 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 TIMP2P16035 220 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 ATF4P18848 351 aaPredicted RBP5.77□□□□□ -1.49
VPS52-222ENST00000495981 ATP4AP20648 1035 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 IDH3AP50213 366 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 PAK2Q13177 524 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 TMEM214Q6NUQ4 689 aaKnown RBP5.77□□□□□ -1.49
VPS52-222ENST00000495981 TTLL6Q8N841 843 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 RHPN1Q8TCX5 695 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 SNX29Q8TEQ0 813 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 ZDHHC3Q9NYG2 299 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 PKD2L1Q9P0L9 805 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 TMEM63CQ9P1W3 806 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 FAM8A1Q9UBU6 413 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 HTTP42858 3142 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 LTBP1Q14766 1721 aa5.77□□□□□ -1.49
VPS52-222ENST00000495981 USP42Q9H9J4 1324 aaKnown RBP5.76□□□□□ -1.49
VPS52-222ENST00000495981 POLR3DP05423 398 aaPredicted RBP5.76□□□□□ -1.49
VPS52-222ENST00000495981 MAP3K10Q02779 954 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 EIF4A2Q14240 407 aaKnown RBP5.76□□□□□ -1.49
VPS52-222ENST00000495981 NFIXQ14938 502 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 EGFLAMQ63HQ2 1017 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 CIAPIN1Q6FI81 312 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 NXPE4Q6UWF7 544 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 C2CD5Q86YS7 1000 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 NPHS2Q9NP85 383 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 FAM13BQ9NYF5 915 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 POLKQ9UBT6 870 aa5.76□□□□□ -1.49
VPS52-222ENST00000495981 TMA7Q9Y2S6 64 aaKnown RBP5.76□□□□□ -1.49
VPS52-222ENST00000495981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.76□□□□□ -1.49
VPS52-222ENST00000495981 LAMB4A4D0S4 1761 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 SPTBN5Q9NRC6 3674 aaKnown RBP5.75□□□□□ -1.49
VPS52-222ENST00000495981 CASP8AP2Q9UKL3 1982 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 SPATA31C2B4DYI2 1134 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 EPHX2P34913 555 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 GPC1P35052 558 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 SLC19A1P41440 591 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 RNF144AP50876 292 aaPredicted RBP5.75□□□□□ -1.49
VPS52-222ENST00000495981 SPRYD7Q5W111 196 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 SDE2Q6IQ49 451 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 PDE12Q6L8Q7 609 aaKnown RBP5.75□□□□□ -1.49
VPS52-222ENST00000495981 ZNF746Q6NUN9 644 aaPredicted RBP5.75□□□□□ -1.49
VPS52-222ENST00000495981 INTS5Q6P9B9 1019 aaKnown RBP5.75□□□□□ -1.49
VPS52-222ENST00000495981 OLFM4Q6UX06 510 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 DLK2Q6UY11 383 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 JAZF1Q86VZ6 243 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 GALNT12Q8IXK2 581 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 MEIOBQ8N635 442 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 GLIS3Q8NEA6 775 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 RASGRP4Q8TDF6 673 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 GPRASP2Q96D09 838 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 BCO2Q9BYV7 579 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 OSBPL2Q9H1P3 480 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 ZSWIM4Q9H7M6 989 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 ELP3Q9H9T3 547 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 TMOD3Q9NYL9 352 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 CNTN3Q9P232 1028 aa5.75□□□□□ -1.49
VPS52-222ENST00000495981 RNF123Q5XPI4 1314 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 CENPFP49454 3210 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 J3QL48 77 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 MAP2K2P36507 400 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 CRKLP46109 303 aaKnown RBP5.74□□□□□ -1.49
VPS52-222ENST00000495981 ARSDP51689 593 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 WDR4P57081 412 aaKnown RBP5.74□□□□□ -1.49
VPS52-222ENST00000495981 SERINC3Q13530 473 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 GRM2Q14416 872 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 ZNF438Q7Z4V0 828 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 BTLAQ7Z6A9 289 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 C3orf58Q8NDZ4 430 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 KBTBD4Q9NVX7 518 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 ADAMTS1Q9UHI8 967 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 HACL1Q9UJ83 578 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 GPC6Q9Y625 555 aaPredicted RBP5.74□□□□□ -1.49
VPS52-222ENST00000495981 CACNA1SQ13698 1873 aa5.74□□□□□ -1.49
VPS52-222ENST00000495981 UNC80Q8N2C7 3258 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 CEP290O15078 2479 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 IQCA1LA6NCM1 817 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 EREGO14944 169 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 PHACTR2O75167 634 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 SERPINB2P05120 415 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 GNASQ5JWF2 1037 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 SAPCD2Q86UD0 394 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 SLC51AQ86UW1 340 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 IFNL2Q8IZJ0 200 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 C1orf127Q8N9H9 656 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 ZNF622Q969S3 477 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS52-222ENST00000495981 INSM2Q96T92 566 aaPredicted RBP5.73□□□□□ -1.49
VPS52-222ENST00000495981 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.73□□□□□ -1.491e-7■■■■□ 21.2
VPS52-222ENST00000495981 SRCIN1Q9C0H9 1055 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 WASF2Q9Y6W5 498 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 FER1L6Q2WGJ9 1857 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 CLSPNQ9HAW4 1339 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 LTBP3Q9NS15 1303 aa5.73□□□□□ -1.49
VPS52-222ENST00000495981 DICER1Q9UPY3 1922 aaKnown RBP5.72□□□□□ -1.49
VPS52-222ENST00000495981 SPINT1O43278 529 aa5.72□□□□□ -1.49
VPS52-222ENST00000495981 STK10O94804 968 aaKnown RBP5.72□□□□□ -1.49
VPS52-222ENST00000495981 NCLP19338 710 aaKnown RBP5.72□□□□□ -1.49
VPS52-222ENST00000495981 HMGB2P26583 209 aaKnown RBP5.72□□□□□ -1.49
VPS52-222ENST00000495981 EPS15P42566 896 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms