RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 CRKP46108 304 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 GMPSP49915 693 aaPredicted RBP12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 PDE4BQ07343 736 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 SGMS1Q86VZ5 419 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 MAPKAPK5Q8IW41 473 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 ZDHHC15Q96MV8 337 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 ZNF408Q9H9D4 720 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 GPHNQ9NQX3 736 aaPredicted RBP12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 FLT1P17948 1338 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 ERICH2A1L162 156 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 BRD1O95696 1058 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 POLR3DP05423 398 aaPredicted RBP12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 VIL1P09327 827 aaKnown RBP12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 SCRN1Q12765 414 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 TMEM67Q5HYA8 995 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 APOBEC3HQ6NTF7 200 aaKnown RBP12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 STK11IPQ8N1F8 1099 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 LY9Q9HBG7 655 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 USP40Q9NVE5 1235 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 SERPINA10Q9UK55 444 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 BRPF3Q9ULD4 1205 aa12.59□□□□□ -0.39
ECHDC3-204ENST00000495787 WTAPQ15007 396 aa12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 CDC42EP5Q6NZY7 148 aa12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 RSBN1LQ6PCB5 846 aaPredicted RBP12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 SMARCC2Q8TAQ2 1214 aa12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 UBAC1Q9BSL1 405 aa12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 NAP1L2Q9ULW6 460 aaPredicted RBP12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 ZDHHC9Q9Y397 364 aa12.58□□□□□ -0.4
ECHDC3-204ENST00000495787 CCDC69A6NI79 296 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 PSMD14O00487 310 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 DHX16O60231 1041 aaKnown RBP12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 RANBP6O60518 1105 aaKnown RBP12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 PDCP20941 246 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 HIRAP54198 1017 aaPredicted RBP12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 HUNKP57058 714 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 HMGN5P82970 282 aaKnown RBP12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 PKP1Q13835 747 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 TNIP1Q15025 636 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 GBP4Q96PP9 640 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 ZNF287Q9HBT7 754 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 SAGE1Q9NXZ1 904 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 SAP30BPQ9UHR5 308 aaKnown RBP12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 HPS5Q9UPZ3 1129 aa12.57□□□□□ -0.4
ECHDC3-204ENST00000495787 STX6O43752 255 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 PRDM1O75626 825 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 RAD17O75943 681 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 SYT1P21579 422 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 PLCD1P51178 756 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 RBM5P52756 815 aaKnown RBP eCLIP12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 RCAN1P53805 252 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 EVX2Q03828 476 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 SEC23AQ15436 765 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 CCDC178Q5BJE1 867 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 APOA5Q6Q788 366 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 C16orf86Q6ZW13 317 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 TTC6Q86TZ1 520 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 IQCA1Q86XH1 822 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 NSUN7Q8NE18 718 aaKnown RBP12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 AGBL3Q8NEM8 1001 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 ZIC5Q96T25 663 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 GMLQ99445 158 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 ZKSCAN3Q9BRR0 538 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 KIF3AQ9Y496 699 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 TNKSO95271 1327 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 NID2Q14112 1375 aa12.56□□□□□ -0.4
ECHDC3-204ENST00000495787 MYH8P13535 1937 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 H7C1D1 291 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 ZBTB43O43298 467 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 CTDNEP1O95476 244 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 MCM4P33991 863 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 PICALMQ13492 652 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 NBR1Q14596 966 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 LARP1BQ659C4 914 aaKnown RBP12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 IDI2Q9BXS1 227 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 OSBPL5Q9H0X9 879 aaPredicted RBP12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 NCOA5Q9HCD5 579 aaKnown RBP12.55□□□□□ -0.4
ECHDC3-204ENST00000495787 DDX4Q9NQI0 724 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms