RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
SHROOM1-206ENST00000495680 BAG3O95817 575 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 BACE1P56817 501 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 TRIB2Q92519 343 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 EAF2Q96CJ1 260 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 P2RX7Q99572 595 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 CCDC8Q9H0W5 538 aaPredicted RBP14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 DHX36Q9H2U1 1008 aaKnown RBP14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 AS3MTQ9HBK9 375 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 MORF4L1Q9UBU8 362 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 ZBTB21Q9ULJ3 1066 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 NR2E3Q9Y5X4 410 aa14.77□□□□□ -0.05
SHROOM1-206ENST00000495680 EVI5O60447 810 aa14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 HMGCRP04035 888 aa14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 ASNSP08243 561 aa14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 PABPC4Q13310 644 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 MIGA1Q8NAN2 632 aa14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 ZNF512BQ96KM6 892 aaPredicted RBP14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-206ENST00000495680 PLCG2P16885 1265 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 CYP2B6P20813 491 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 CYP7A1P22680 504 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 HOXA7P31268 230 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 HERVK_113P62684 666 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 IRX3P78415 501 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 Q3C1V9 767 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 FOXP4Q8IVH2 680 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 CRACR2BQ8N4Y2 399 aaPredicted RBP14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 ANTXR1Q9H6X2 564 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 TMOD4Q9NZQ9 345 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 RBPJLQ9UBG7 517 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 LAMA3Q16787 3333 aa14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 DDX60LQ5H9U9 1706 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-206ENST00000495680 MYH1P12882 1939 aa14.74□□□□□ -0.05
SHROOM1-206ENST00000495680 USP17L10C9JJH3 530 aa14.74□□□□□ -0.05
SHROOM1-206ENST00000495680 SOX1O00570 391 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-206ENST00000495680 IDH1O75874 414 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-206ENST00000495680 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
SHROOM1-206ENST00000495680 PORCNQ9H237 461 aa14.74□□□□□ -0.05
SHROOM1-206ENST00000495680 STAP2Q9UGK3 403 aa14.74□□□□□ -0.05
SHROOM1-206ENST00000495680 RPTORQ8N122 1335 aa14.73□□□□□ -0.05
SHROOM1-206ENST00000495680 GH2P01242 217 aa14.73□□□□□ -0.05
SHROOM1-206ENST00000495680 MAP3K21Q5TCX8 1036 aa14.73□□□□□ -0.05
SHROOM1-206ENST00000495680 NECAB2Q7Z6G3 386 aa14.73□□□□□ -0.05
SHROOM1-206ENST00000495680 MAGEB6Q8N7X4 407 aa14.73□□□□□ -0.05
SHROOM1-206ENST00000495680 GPRC5AQ8NFJ5 357 aa14.73□□□□□ -0.05
SHROOM1-206ENST00000495680 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
SHROOM1-206ENST00000495680 C19orf81C9J6K1 198 aa14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 EVX2Q03828 476 aa14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 ZYXQ15942 572 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 CCL14Q16627 93 aa14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 CEP85Q6P2H3 762 aa14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 C7orf61Q8IZ16 206 aa14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 PAGR1Q9BTK6 254 aa14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 HMX1Q9NP08 348 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 ZMYND8Q9ULU4 1186 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 EXOC6BQ9Y2D4 811 aa14.72□□□□□ -0.05
SHROOM1-206ENST00000495680 HLA-DOAP06340 250 aa14.71□□□□□ -0.05
SHROOM1-206ENST00000495680 ERVK-9P63128 1117 aa14.71□□□□□ -0.05
SHROOM1-206ENST00000495680 ERVK-24P63145 666 aa14.71□□□□□ -0.05
SHROOM1-206ENST00000495680 HNRNPUQ00839 825 aaKnown RBP eCLIP14.71□□□□□ -0.05
SHROOM1-206ENST00000495680 TATDN1Q6P1N9 297 aa14.71□□□□□ -0.05
SHROOM1-206ENST00000495680 USP6NLQ92738 828 aa14.71□□□□□ -0.05
SHROOM1-206ENST00000495680 LRCH3Q96II8 777 aa14.71□□□□□ -0.05
SHROOM1-206ENST00000495680 CNMDO75829 334 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 CCND3P30281 292 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 USP5P45974 858 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 MORN1Q5T089 497 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 USP17L2Q6R6M4 530 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 GPR142Q7Z601 462 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 AACSQ86V21 672 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 ANKLE1Q8NAG6 615 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 PANK1Q8TE04 598 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 SOCS4Q8WXH5 440 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 NUDT12Q9BQG2 462 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 NBPF3Q9H094 633 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 GINM1Q9NU53 330 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 OGDHLQ9ULD0 1010 aa14.7□□□□□ -0.06
SHROOM1-206ENST00000495680 PFASO15067 1338 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 XRCC5P13010 732 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 SYN1P17600 705 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 CAPN2P17655 700 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 PLCD1P51178 756 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 CACNB2Q08289 660 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 C12orf42Q96LP6 360 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 FEZ1Q99689 392 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 GDF15Q99988 308 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 RIOK1Q9BRS2 568 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 C11orf49Q9H6J7 331 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 IL1RAPL2Q9NP60 686 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 SERPINB13Q9UIV8 391 aa14.69□□□□□ -0.06
SHROOM1-206ENST00000495680 ZKSCAN1P17029 563 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-206ENST00000495680 MAPK4P31152 587 aa14.68□□□□□ -0.06
SHROOM1-206ENST00000495680 GUCY1A2P33402 732 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms