RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 COX4I2Q96KJ9 171 aa8.88□□□□□ -0.99
NCKAP1-208ENST00000495619 MIPEPQ99797 713 aa8.88□□□□□ -0.99
NCKAP1-208ENST00000495619 TMEM265A0A087WTH1 108 aa8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 PRNPP04156 253 aa8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 NKG7Q16617 165 aa8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 LETMD1Q6P1Q0 360 aa8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 MRRFQ96E11 262 aaKnown RBP8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 KCNQ5Q9NR82 932 aa8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 TJP2Q9UDY2 1190 aa8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 MAPK8IP1Q9UQF2 711 aa8.87□□□□□ -0.99
NCKAP1-208ENST00000495619 CEACAM5P06731 702 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 FBXL19Q6PCT2 694 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 REC114Q7Z4M0 266 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 USP48Q86UV5 1035 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 FAM181AQ8N9Y4 354 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 FAM13CQ8NE31 585 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 CCDC39Q9UFE4 941 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 SLC5A6Q9Y289 635 aa8.86□□□□□ -0.99
NCKAP1-208ENST00000495619 SLITRK5O94991 958 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 ETV3P41162 512 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 GP2P55259 537 aaKnown RBP8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 CHMP4BP1P59074 171 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 APOBRQ0VD83 1088 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 TMEM201Q5SNT2 666 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 SFRP5Q5T4F7 317 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 AGBL5Q8NDL9 886 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 XAGE3Q8WTP9 111 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 SPON2Q9BUD6 331 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 LRRC3Q9BY71 257 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 VAV3Q9UKW4 847 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 SNX11Q9Y5W9 270 aa8.85□□□□□ -0.99
NCKAP1-208ENST00000495619 PRR36Q9H6K5 1346 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 FAM155AB1AL88 458 aaPredicted RBP8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 TLR3O15455 904 aaKnown RBP8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 GREM1O60565 184 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 ITIH2P19823 946 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 GARTP22102 1010 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 OXCT1P55809 520 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 FANCCQ00597 558 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 XP32Q5T750 250 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 KIAA0825Q8IV33 1275 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 TP53INP2Q8IXH6 220 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 PLD6Q8N2A8 252 aaKnown RBP8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 FLCNQ8NFG4 579 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 HRASLS5Q96KN8 279 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 CORINQ9Y5Q5 1042 aa8.84□□□□□ -0.99
NCKAP1-208ENST00000495619 GRIN3BO60391 1043 aa8.83□□□□□ -1
NCKAP1-208ENST00000495619 HTR3BO95264 441 aa8.83□□□□□ -1
NCKAP1-208ENST00000495619 EOMESO95936 686 aa8.83□□□□□ -1
NCKAP1-208ENST00000495619 LDLRAD1Q5T700 205 aa8.83□□□□□ -1
NCKAP1-208ENST00000495619 ACSF2Q96CM8 615 aaPredicted RBP8.83□□□□□ -1
NCKAP1-208ENST00000495619 HEXIM2Q96MH2 286 aaKnown RBP8.83□□□□□ -1
NCKAP1-208ENST00000495619 REV1Q9UBZ9 1251 aa8.83□□□□□ -1
NCKAP1-208ENST00000495619 ZNF165P49910 485 aa8.82□□□□□ -1
NCKAP1-208ENST00000495619 PRKCQQ04759 706 aa8.82□□□□□ -1
NCKAP1-208ENST00000495619 NKD1Q969G9 470 aa8.82□□□□□ -1
NCKAP1-208ENST00000495619 DPH2Q9BQC3 489 aaPredicted RBP8.82□□□□□ -1
NCKAP1-208ENST00000495619 NT5C1AQ9BXI3 368 aa8.82□□□□□ -1
NCKAP1-208ENST00000495619 ADAMTS1Q9UHI8 967 aa8.82□□□□□ -1
NCKAP1-208ENST00000495619 RECKO95980 971 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 MCM4P33991 863 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 KIR3DL1P43629 444 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 TNNI2P48788 182 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 CLCN7P51798 805 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 FAM214BQ7L5A3 538 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 ZNF654Q8IZM8 581 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 FBXO27Q8NI29 283 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 CYB5D2Q8WUJ1 264 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 KLHL3Q9UH77 587 aa8.81□□□□□ -1
NCKAP1-208ENST00000495619 AOC3Q16853 763 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 SEZ6Q53EL9 994 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 C22orf34Q6ZV56 151 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 CDH24Q86UP0 819 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 SLFN12Q8IYM2 578 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 REXO1Q8N1G1 1221 aaKnown RBP8.8□□□□□ -1
NCKAP1-208ENST00000495619 MFSD4AQ8N468 514 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
NCKAP1-208ENST00000495619 ASB11Q8WXH4 323 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 CCDC74BQ96LY2 380 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 BRMS1Q9HCU9 246 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 CEP131Q9UPN4 1083 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 POLR3KQ9Y2Y1 108 aaPredicted RBP8.8□□□□□ -1
NCKAP1-208ENST00000495619 PCDHB14Q9Y5E9 798 aa8.8□□□□□ -1
NCKAP1-208ENST00000495619 IRAK1P51617 712 aa8.79□□□□□ -1
NCKAP1-208ENST00000495619 LRRFIP1Q32MZ4 808 aaKnown RBP8.79□□□□□ -1
NCKAP1-208ENST00000495619 PHACTR4Q8IZ21 702 aa8.79□□□□□ -1
NCKAP1-208ENST00000495619 TNKS2Q9H2K2 1166 aa8.79□□□□□ -1
NCKAP1-208ENST00000495619 UBP1Q9NZI7 540 aa8.79□□□□□ -1
NCKAP1-208ENST00000495619 ATE1O95260 518 aa8.78□□□□□ -1
NCKAP1-208ENST00000495619 CBX7O95931 251 aa8.78□□□□□ -1
NCKAP1-208ENST00000495619 RIN3Q8TB24 985 aa8.78□□□□□ -1
NCKAP1-208ENST00000495619 PODXL2Q9NZ53 605 aa8.78□□□□□ -1
NCKAP1-208ENST00000495619 UPK3BL1B0FP48 263 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 UPK3BL2E5RIL1 263 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 ZNF865P0CJ78 1059 aaPredicted RBP8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 GBP1P32455 592 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 ZNF394Q53GI3 561 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 ANGEL2Q5VTE6 544 aaKnown RBP8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 SPATA32Q96LK8 384 aa8.77□□□□□ -1.01
NCKAP1-208ENST00000495619 EHMT1Q9H9B1 1298 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms