RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 GGA3Q9NZ52 723 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 ISY1Q9ULR0 285 aaKnown RBP11.98□□□□□ -0.49
HDAC3-214ENST00000495485 JAG2Q9Y219 1238 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 ZDHHC9Q9Y397 364 aa11.98□□□□□ -0.49
HDAC3-214ENST00000495485 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
HDAC3-214ENST00000495485 PASKQ96RG2 1323 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 GPR75-ASB3A0A0A6YYF3 556 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 GOLGA8BA8MQT2 603 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 SH2B2O14492 632 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-214ENST00000495485 ZBTB43O43298 467 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 KDM4AO75164 1064 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
HDAC3-214ENST00000495485 CALM1P0DP23 149 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 CALM2P0DP24 149 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 CALM3P0DP25 149 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 METAP2P50579 478 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC3-214ENST00000495485 DYNLL1P63167 89 aaKnown RBP11.97□□□□□ -0.49
HDAC3-214ENST00000495485 KLHL40Q2TBA0 621 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 NBPF9Q3BBW0 867 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 SUPT20HL1Q3ZLR7 823 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 RRP12Q5JTH9 1297 aaKnown RBP11.97□□□□□ -0.49
HDAC3-214ENST00000495485 RBM26Q5T8P6 1007 aaKnown RBP11.97□□□□□ -0.49
HDAC3-214ENST00000495485 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 ADGRA1Q86SQ6 560 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 SGMS1Q86VZ5 419 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 TBC1D10CQ8IV04 446 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 SDR42E1Q8WUS8 393 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 WASF1Q92558 559 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 DAGLAQ9Y4D2 1042 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
HDAC3-214ENST00000495485 FOCADQ5VW36 1801 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 ORC4O43929 436 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 APLP1P51693 650 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 ANTXR2P58335 489 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 CCT2P78371 535 aaKnown RBP11.96□□□□□ -0.49
HDAC3-214ENST00000495485 KRT85P78386 507 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 PKP1Q13835 747 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
HDAC3-214ENST00000495485 ATL3Q6DD88 541 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 APOBEC3HQ6NTF7 200 aaKnown RBP11.96□□□□□ -0.49
HDAC3-214ENST00000495485 CTR9Q6PD62 1173 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 IGDCC4Q8TDY8 1250 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 PRMT6Q96LA8 375 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-214ENST00000495485 IDI2Q9BXS1 227 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 DCP1AQ9NPI6 582 aaPredicted RBP11.96□□□□□ -0.49
HDAC3-214ENST00000495485 ZSWIM5Q9P217 1185 aa11.96□□□□□ -0.49
HDAC3-214ENST00000495485 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 LAMB1P07942 1786 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 NEDD4P46934 1319 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 SHTN1A0MZ66 631 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 PTPDC1A2A3K4 754 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 USP17L12C9JPN9 530 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 USP17L21D6R901 530 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 ENTPD3O75355 529 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 EGFRP00533 1210 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 POLR3DP05423 398 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 FGRP09769 529 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 HSPA6P17066 643 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 FOXD4L5Q5VV16 416 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 MAP1SQ66K74 1059 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 CYB5R4Q7L1T6 521 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 FOXD4L4Q8WXT5 416 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 SCAND2PQ9GZW5 306 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 CREBZFQ9NS37 354 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 ZNF70Q9UC06 446 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-214ENST00000495485 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
HDAC3-214ENST00000495485 BAZ2AQ9UIF9 1905 aaKnown RBP11.94□□□□□ -0.5
HDAC3-214ENST00000495485 TMEM88BA6NKF7 163 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 GOLGA8AA7E2F4 631 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 RANBP6O60518 1105 aaKnown RBP11.94□□□□□ -0.5
HDAC3-214ENST00000495485 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 BTDP43251 543 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 TRIM29Q14134 588 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 GRIK5Q16478 980 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 L1TD1Q5T7N2 865 aaKnown RBP11.94□□□□□ -0.5
HDAC3-214ENST00000495485 APOA5Q6Q788 366 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 CATIPQ7Z7H3 387 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 DEFB129Q9H1M3 183 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 LY9Q9HBG7 655 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
HDAC3-214ENST00000495485 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
HDAC3-214ENST00000495485 XBP1P17861 261 aa11.93□□□□□ -0.5
HDAC3-214ENST00000495485 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
HDAC3-214ENST00000495485 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
HDAC3-214ENST00000495485 ST3GAL1Q11201 340 aa11.93□□□□□ -0.5
HDAC3-214ENST00000495485 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
HDAC3-214ENST00000495485 IFIT1BQ5T764 474 aaKnown RBP11.93□□□□□ -0.5
HDAC3-214ENST00000495485 CDC42EP5Q6NZY7 148 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms