RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 HLA-DOAP06340 250 aa18.02■□□□□ 0.48
PTPN18-216ENST00000495400 CYP7A1P22680 504 aa18.02■□□□□ 0.48
PTPN18-216ENST00000495400 HOXA7P31268 230 aaPredicted RBP18.02■□□□□ 0.48
PTPN18-216ENST00000495400 DYNLL1P63167 89 aaKnown RBP18.02■□□□□ 0.48
PTPN18-216ENST00000495400 IRX3P78415 501 aaPredicted RBP18.02■□□□□ 0.48
PTPN18-216ENST00000495400 JAG1P78504 1218 aa18.02■□□□□ 0.48
PTPN18-216ENST00000495400 DEFB118Q96PH6 123 aa18.02■□□□□ 0.48
PTPN18-216ENST00000495400 PAK6Q9NQU5 681 aaPredicted RBP18.02■□□□□ 0.48
PTPN18-216ENST00000495400 MORF4L1Q9UBU8 362 aa18.02■□□□□ 0.48
PTPN18-216ENST00000495400 SAP30BPQ9UHR5 308 aaKnown RBP18.02■□□□□ 0.48
PTPN18-216ENST00000495400 TRIOBPQ9H2D6 2365 aa18.01■□□□□ 0.47
PTPN18-216ENST00000495400 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
PTPN18-216ENST00000495400 GDF11O95390 407 aa18.01■□□□□ 0.47
PTPN18-216ENST00000495400 CHRDL2Q6WN34 429 aa18.01■□□□□ 0.47
PTPN18-216ENST00000495400 GJD2Q9UKL4 321 aa18.01■□□□□ 0.47
PTPN18-216ENST00000495400 NR2E3Q9Y5X4 410 aa18.01■□□□□ 0.47
PTPN18-216ENST00000495400 PLXNB2O15031 1838 aa18■□□□□ 0.47
PTPN18-216ENST00000495400 IDH1O75874 414 aaKnown RBP18■□□□□ 0.47
PTPN18-216ENST00000495400 CEP85Q6P2H3 762 aa18■□□□□ 0.47
PTPN18-216ENST00000495400 CERS3Q8IU89 383 aa18■□□□□ 0.47
PTPN18-216ENST00000495400 P2RX7Q99572 595 aaKnown RBP18■□□□□ 0.47
PTPN18-216ENST00000495400 CRISPLD2Q9H0B8 497 aa18■□□□□ 0.47
PTPN18-216ENST00000495400 ZBTB21Q9ULJ3 1066 aa18■□□□□ 0.47
PTPN18-216ENST00000495400 HMGCRP04035 888 aa17.99■□□□□ 0.47
PTPN18-216ENST00000495400 SHROOM1Q2M3G4 852 aaPredicted RBP17.99■□□□□ 0.47
PTPN18-216ENST00000495400 ERC1Q8IUD2 1116 aa17.99■□□□□ 0.47
PTPN18-216ENST00000495400 MIER1Q8N108 512 aa17.99■□□□□ 0.47
PTPN18-216ENST00000495400 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.99■□□□□ 0.47
PTPN18-216ENST00000495400 USP5P45974 858 aa17.98■□□□□ 0.47
PTPN18-216ENST00000495400 HERVK_113P62684 666 aa17.98■□□□□ 0.47
PTPN18-216ENST00000495400 TMED8Q6PL24 325 aaPredicted RBP17.98■□□□□ 0.47
PTPN18-216ENST00000495400 MAGEB6Q8N7X4 407 aa17.98■□□□□ 0.47
PTPN18-216ENST00000495400 MIGA1Q8NAN2 632 aa17.98■□□□□ 0.47
PTPN18-216ENST00000495400 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
PTPN18-216ENST00000495400 NDUFB9Q9Y6M9 179 aa17.98■□□□□ 0.47
PTPN18-216ENST00000495400 MAP3K12Q12852 859 aa17.97■□□□□ 0.47
PTPN18-216ENST00000495400 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
PTPN18-216ENST00000495400 AACSQ86V21 672 aa17.97■□□□□ 0.47
PTPN18-216ENST00000495400 GPRC5AQ8NFJ5 357 aa17.97■□□□□ 0.47
PTPN18-216ENST00000495400 ANTXR1Q9H6X2 564 aa17.97■□□□□ 0.47
PTPN18-216ENST00000495400 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
PTPN18-216ENST00000495400 RPTORQ8N122 1335 aa17.97■□□□□ 0.47
PTPN18-216ENST00000495400 EVI5O60447 810 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 GH2P01242 217 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 TATDN1Q6P1N9 297 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 TTC6Q86TZ1 520 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 GTF3C2Q8WUA4 911 aaPredicted RBP17.96■□□□□ 0.47
PTPN18-216ENST00000495400 PAWRQ96IZ0 340 aaKnown RBP17.96■□□□□ 0.47
PTPN18-216ENST00000495400 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 HMX1Q9NP08 348 aaPredicted RBP17.96■□□□□ 0.47
PTPN18-216ENST00000495400 EMILIN3Q9NT22 766 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 RBPJLQ9UBG7 517 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 SERPINB13Q9UIV8 391 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 ALPK3Q96L96 1907 aa17.96■□□□□ 0.47
PTPN18-216ENST00000495400 PEX10O60683 326 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 CYP2B6P20813 491 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 MAPK4P31152 587 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 TRIM32Q13049 653 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 HSP90AB4PQ58FF6 505 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 NECAB2Q7Z6G3 386 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 ANKLE1Q8NAG6 615 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 PANK1Q8TE04 598 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 TRIB2Q92519 343 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 NUDT12Q9BQG2 462 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 EHD4Q9H223 541 aa17.95■□□□□ 0.46
PTPN18-216ENST00000495400 Q3C1V9 767 aa17.94■□□□□ 0.46
PTPN18-216ENST00000495400 SOCS4Q8WXH5 440 aa17.94■□□□□ 0.46
PTPN18-216ENST00000495400 PRO3102Q9H379 93 aa17.94■□□□□ 0.46
PTPN18-216ENST00000495400 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
PTPN18-216ENST00000495400 MS4A1P11836 297 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
PTPN18-216ENST00000495400 ERVK-9P63128 1117 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 ERVK-24P63145 666 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 PDE3AQ14432 1141 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 TTF1Q15361 905 aaPredicted RBP17.93■□□□□ 0.46
PTPN18-216ENST00000495400 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
PTPN18-216ENST00000495400 CCAR1Q8IX12 1150 aaKnown RBP17.93■□□□□ 0.46
PTPN18-216ENST00000495400 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
PTPN18-216ENST00000495400 RHPN1Q8TCX5 695 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 DIS3LQ8TF46 1054 aaKnown RBP17.93■□□□□ 0.46
PTPN18-216ENST00000495400 C12orf42Q96LP6 360 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 RIOK1Q9BRS2 568 aaKnown RBP17.93■□□□□ 0.46
PTPN18-216ENST00000495400 PAGR1Q9BTK6 254 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 IL1RAPL2Q9NP60 686 aa17.93■□□□□ 0.46
PTPN18-216ENST00000495400 MAGEB6P1A0A0J9YX57 407 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L15C9J2P7 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L13C9JLJ4 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L11C9JVI0 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L18D6R9N7 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L22D6RA61 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L17D6RBQ6 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L19D6RCP7 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L20D6RJB6 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP14P54578 494 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 USP17L24Q0WX57 530 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 ZYXQ15942 572 aaKnown RBP17.92■□□□□ 0.46
PTPN18-216ENST00000495400 ABCB5Q2M3G0 1257 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 DIEXFQ68CQ4 756 aaKnown RBP17.92■□□□□ 0.46
PTPN18-216ENST00000495400 FEZ1Q99689 392 aa17.92■□□□□ 0.46
PTPN18-216ENST00000495400 CABP5Q9NP86 173 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms