RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 PRMT6Q96LA8 375 aaPredicted RBP19.05■□□□□ 0.64
CBX4-204ENST00000495122 DEFB129Q9H1M3 183 aa19.05■□□□□ 0.64
CBX4-204ENST00000495122 PPP2R3BQ9Y5P8 575 aa19.05■□□□□ 0.64
CBX4-204ENST00000495122 CLRN2A0PK11 232 aa19.04■□□□□ 0.64
CBX4-204ENST00000495122 MYO1BO43795 1136 aa19.04■□□□□ 0.64
CBX4-204ENST00000495122 CYP7A1P22680 504 aa19.04■□□□□ 0.64
CBX4-204ENST00000495122 NAA16Q6N069 864 aaPredicted RBP19.04■□□□□ 0.64
CBX4-204ENST00000495122 ARMC9Q7Z3E5 817 aa19.04■□□□□ 0.64
CBX4-204ENST00000495122 CERS3Q8IU89 383 aa19.04■□□□□ 0.64
CBX4-204ENST00000495122 ZSCAN16Q9H4T2 348 aaPredicted RBP19.04■□□□□ 0.64
CBX4-204ENST00000495122 MAGEB6P1A0A0J9YX57 407 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 GSG1L2A8MUP6 293 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 TRPA1O75762 1119 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 PDIA3P30101 505 aaKnown RBP19.03■□□□□ 0.64
CBX4-204ENST00000495122 MRE11P49959 708 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 ZNF445P59923 1031 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 SCRN1Q12765 414 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
CBX4-204ENST00000495122 WDR66Q8TBY9 1149 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 STAG1Q8WVM7 1258 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 RAI14Q9P0K7 980 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 ANAPC4Q9UJX5 808 aa19.03■□□□□ 0.64
CBX4-204ENST00000495122 TTF2Q9UNY4 1162 aaKnown RBP19.03■□□□□ 0.64
CBX4-204ENST00000495122 RCAN1P53805 252 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 HAND2P61296 217 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 APOBRQ0VD83 1088 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 PRKG1Q13976 671 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 LDLRAD1Q5T700 205 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 FAM184AQ8NB25 1140 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 NSUN7Q8NE18 718 aaKnown RBP19.02■□□□□ 0.64
CBX4-204ENST00000495122 MCOLN1Q9GZU1 580 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 ARMT1Q9H993 441 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 EPB41L4AQ9HCS5 686 aaPredicted RBP19.02■□□□□ 0.64
CBX4-204ENST00000495122 SERPINA10Q9UK55 444 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 ANGEL1Q9UNK9 670 aaKnown RBP19.02■□□□□ 0.64
CBX4-204ENST00000495122 FZD1Q9UP38 647 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 IQSEC3Q9UPP2 1182 aaPredicted RBP19.02■□□□□ 0.64
CBX4-204ENST00000495122 SLC4A4Q9Y6R1 1079 aa19.02■□□□□ 0.64
CBX4-204ENST00000495122 ELP1O95163 1332 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
CBX4-204ENST00000495122 TDO2P48775 406 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 RBM5P52756 815 aaKnown RBP eCLIP19.01■□□□□ 0.63
CBX4-204ENST00000495122 STK3Q13188 491 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 MAP3K11Q16584 847 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 SPDYE2Q495Y8 402 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 AKNAD1Q5T1N1 836 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 ATL3Q6DD88 541 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 SGMS1Q86VZ5 419 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 NBPF3Q9H094 633 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 VEZTQ9HBM0 779 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 ABCF2Q9UG63 623 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 NID2Q14112 1375 aa19.01■□□□□ 0.63
CBX4-204ENST00000495122 CDKL5O76039 1030 aa19■□□□□ 0.63
CBX4-204ENST00000495122 LIFRP42702 1097 aa19■□□□□ 0.63
CBX4-204ENST00000495122 ANTXR2P58335 489 aa19■□□□□ 0.63
CBX4-204ENST00000495122 UBE2HP62256 183 aa19■□□□□ 0.63
CBX4-204ENST00000495122 KRT85P78386 507 aa19■□□□□ 0.63
CBX4-204ENST00000495122 DGKZQ13574 1117 aa19■□□□□ 0.63
CBX4-204ENST00000495122 SART3Q15020 963 aaKnown RBP19■□□□□ 0.63
CBX4-204ENST00000495122 GRIK5Q16478 980 aa19■□□□□ 0.63
CBX4-204ENST00000495122 FOXD4L5Q5VV16 416 aaPredicted RBP19■□□□□ 0.63
CBX4-204ENST00000495122 TBC1D10CQ8IV04 446 aa19■□□□□ 0.63
CBX4-204ENST00000495122 TMTC2Q8N394 836 aa19■□□□□ 0.63
CBX4-204ENST00000495122 LCORLQ8N3X6 602 aa19■□□□□ 0.63
CBX4-204ENST00000495122 FOXD4L4Q8WXT5 416 aaPredicted RBP19■□□□□ 0.63
CBX4-204ENST00000495122 RIOK1Q9BRS2 568 aaKnown RBP19■□□□□ 0.63
CBX4-204ENST00000495122 SCAND2PQ9GZW5 306 aaPredicted RBP19■□□□□ 0.63
CBX4-204ENST00000495122 GZF1Q9H116 711 aaPredicted RBP19■□□□□ 0.63
CBX4-204ENST00000495122 CDK5RAP2Q96SN8 1893 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 PTPDC1A2A3K4 754 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 SH2B2O14492 632 aaPredicted RBP18.99■□□□□ 0.63
CBX4-204ENST00000495122 CRKP46108 304 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 TM4SF4P48230 202 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 GSTO1P78417 241 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 CHAF1AQ13111 956 aaPredicted RBP18.99■□□□□ 0.63
CBX4-204ENST00000495122 CPLX2Q6PUV4 134 aaKnown RBP18.99■□□□□ 0.63
CBX4-204ENST00000495122 MFSD6Q6ZSS7 791 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 TBC1D22AQ8WUA7 517 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 NSUN4Q96CB9 384 aaKnown RBP18.99■□□□□ 0.63
CBX4-204ENST00000495122 LRRC2Q9BYS8 371 aa18.99■□□□□ 0.63
CBX4-204ENST00000495122 ZNF70Q9UC06 446 aaPredicted RBP18.99■□□□□ 0.63
CBX4-204ENST00000495122 TNRC18O15417 2968 aaPredicted RBP18.98■□□□□ 0.63
CBX4-204ENST00000495122 KLF18A0A0U1RQI7 1052 aa18.98■□□□□ 0.63
CBX4-204ENST00000495122 H3BQV1 296 aa18.98■□□□□ 0.63
CBX4-204ENST00000495122 MKRN3Q13064 507 aaKnown RBP18.98■□□□□ 0.63
CBX4-204ENST00000495122 RASA3Q14644 834 aa18.98■□□□□ 0.63
CBX4-204ENST00000495122 NBPF12Q5TAG4 269 aaPredicted RBP18.98■□□□□ 0.63
CBX4-204ENST00000495122 GPT2Q8TD30 523 aa18.98■□□□□ 0.63
CBX4-204ENST00000495122 TDRD3Q9H7E2 651 aaKnown RBP18.98■□□□□ 0.63
CBX4-204ENST00000495122 GOLGA8BA8MQT2 603 aa18.97■□□□□ 0.63
CBX4-204ENST00000495122 LETM1O95202 739 aaPredicted RBP18.97■□□□□ 0.63
CBX4-204ENST00000495122 HDLBPQ00341 1268 aaKnown RBP18.97■□□□□ 0.63
CBX4-204ENST00000495122 TNFAIP1Q13829 316 aa18.97■□□□□ 0.63
CBX4-204ENST00000495122 SUPT20HL1Q3ZLR7 823 aa18.97■□□□□ 0.63
CBX4-204ENST00000495122 SPRYD7Q5W111 196 aa18.97■□□□□ 0.63
CBX4-204ENST00000495122 CRNKL1Q9BZJ0 848 aaKnown RBP18.97■□□□□ 0.63
CBX4-204ENST00000495122 ATP8A2Q9NTI2 1148 aa18.97■□□□□ 0.63
CBX4-204ENST00000495122 PTPRFP10586 1907 aa18.97■□□□□ 0.63
CBX4-204ENST00000495122 RBBP6Q7Z6E9 1792 aaKnown RBP18.96■□□□□ 0.63
CBX4-204ENST00000495122 CCDC85CA6NKD9 419 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms