RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 ME3Q16798 604 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 APOBEC3FQ8IUX4 373 aaKnown RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 GPHNQ9NQX3 736 aaPredicted RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 HERC5Q9UII4 1024 aaKnown RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 PLIN4Q96Q06 1357 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 TBC1D12O60347 775 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 ASTN2O75129 1339 aaPredicted RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 TNKSO95271 1327 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 RASA3Q14644 834 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 CRACR2BQ8N4Y2 399 aaPredicted RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
SLC13A3-211ENST00000495082 SIPA1L1O43166 1804 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 LARGE1O95461 756 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 TSPY3P0CV98 308 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 TSPY8P0CW00 308 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 APOBRQ0VD83 1088 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 WTAPQ15007 396 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 TATDN1Q6P1N9 297 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 ENAHQ8N8S7 591 aaPredicted RBP13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 ANKS1AQ92625 1134 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 CCDC17Q96LX7 622 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 ZKSCAN3Q9BRR0 538 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 PPP2R3BQ9Y5P8 575 aa13.52□□□□□ -0.25
SLC13A3-211ENST00000495082 IQCA1LA6NCM1 817 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 PFKFB2O60825 505 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 HSP90AA1P07900 732 aaKnown RBP13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 RCAN1P53805 252 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 MAP3K10Q02779 954 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 ANGEL2Q5VTE6 544 aaKnown RBP13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 USP50Q70EL3 339 aaPredicted RBP13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 DGKHQ86XP1 1220 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 DEFB129Q9H1M3 183 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 IL17RBQ9NRM6 502 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 GGA3Q9NZ52 723 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
SLC13A3-211ENST00000495082 KLF18A0A0U1RQI7 1052 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 NOVP48745 357 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 GTF3C6Q969F1 213 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 SLKQ9H2G2 1235 aaPredicted RBP13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 SENP2Q9HC62 589 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 IFIT1BQ5T764 474 aaKnown RBP13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 APOA5Q6Q788 366 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLC13A3-211ENST00000495082 NID2Q14112 1375 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 IGKV6D-41A0A0C4DH26 115 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 CCDC69A6NI79 296 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 NMT2O60551 498 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 AKR1B1P15121 316 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 EPHX2P34913 555 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 RCSD1Q6JBY9 416 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 HPS5Q9UPZ3 1129 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 SLC12A7Q9Y666 1083 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 WDR90Q96KV7 1748 aa13.49□□□□□ -0.25
SLC13A3-211ENST00000495082 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 SCRN1Q12765 414 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 CCDC83Q8IWF9 413 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 HOOK2Q96ED9 719 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 TAF1DQ9H5J8 278 aaPredicted RBP13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 CWC22Q9HCG8 908 aaKnown RBP13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 SCN4AP35499 1836 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 FAM196BA6NMK8 535 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 POTECB2RU33 542 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 ZBTB43O43298 467 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 DDIT3P35638 169 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 STK3Q13188 491 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 LLPHQ9BRT6 129 aaKnown RBP13.48□□□□□ -0.25
SLC13A3-211ENST00000495082 DHX16O60231 1041 aaKnown RBP13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 DDAH1O94760 285 aa13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 TMEM179Q6ZVK1 233 aa13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 PNMA8AQ86V59 439 aaPredicted RBP13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 ZNF654Q8IZM8 581 aa13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 DCPSQ96C86 337 aaKnown RBP13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
SLC13A3-211ENST00000495082 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms