RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 HTTP42858 3142 aa12.88□□□□□ -0.35
NELFE-213ENST00000494956 PEX10O60683 326 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 CYP2D6P10635 497 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 BCRP11274 1271 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 MTMR2Q13614 643 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 KIF22Q14807 665 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 METTL16Q86W50 562 aaKnown RBP12.87□□□□□ -0.35
NELFE-213ENST00000494956 FOXP4Q8IVH2 680 aaPredicted RBP12.87□□□□□ -0.35
NELFE-213ENST00000494956 ZNF280CQ8ND82 737 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 DOCK3Q8IZD9 2030 aa12.87□□□□□ -0.35
NELFE-213ENST00000494956 IGSF3O75054 1194 aa12.86□□□□□ -0.35
NELFE-213ENST00000494956 FMNL1O95466 1100 aaPredicted RBP12.86□□□□□ -0.35
NELFE-213ENST00000494956 OSBPP22059 807 aa12.86□□□□□ -0.35
NELFE-213ENST00000494956 ADD2P35612 726 aa12.86□□□□□ -0.35
NELFE-213ENST00000494956 ANKRD13CQ8N6S4 541 aa12.86□□□□□ -0.35
NELFE-213ENST00000494956 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
NELFE-213ENST00000494956 ZBTB21Q9ULJ3 1066 aa12.86□□□□□ -0.35
NELFE-213ENST00000494956 GABRQQ9UN88 632 aa12.86□□□□□ -0.35
NELFE-213ENST00000494956 TNRC18O15417 2968 aaPredicted RBP12.85□□□□□ -0.35
NELFE-213ENST00000494956 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
NELFE-213ENST00000494956 MBD4O95243 580 aa12.85□□□□□ -0.35
NELFE-213ENST00000494956 GH2P01242 217 aa12.85□□□□□ -0.35
NELFE-213ENST00000494956 POLR3DP05423 398 aaPredicted RBP12.85□□□□□ -0.35
NELFE-213ENST00000494956 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
NELFE-213ENST00000494956 SLC44A5Q8NCS7 719 aa12.85□□□□□ -0.35
NELFE-213ENST00000494956 DYNLL2Q96FJ2 89 aa12.85□□□□□ -0.35
NELFE-213ENST00000494956 CRNKL1Q9BZJ0 848 aaKnown RBP12.85□□□□□ -0.35
NELFE-213ENST00000494956 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
NELFE-213ENST00000494956 MCM9Q9NXL9 1143 aa12.85□□□□□ -0.35
NELFE-213ENST00000494956 SERPINB13Q9UIV8 391 aa12.85□□□□□ -0.35
NELFE-213ENST00000494956 MYH8P13535 1937 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 ASNSP08243 561 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 SHMT1P34896 483 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 PRKCZQ05513 592 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 SLC9C1Q4G0N8 1177 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 SH3D19Q5HYK7 790 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 TATDN1Q6P1N9 297 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
NELFE-213ENST00000494956 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
NELFE-213ENST00000494956 ARMC5Q96C12 935 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 ZNF333Q96JL9 665 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 PUS7LQ9H0K6 701 aaKnown RBP12.84□□□□□ -0.35
NELFE-213ENST00000494956 ASCC2Q9H1I8 757 aaPredicted RBP12.84□□□□□ -0.35
NELFE-213ENST00000494956 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 ECHDC1Q9NTX5 307 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 SRRDQ9UH36 339 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
NELFE-213ENST00000494956 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
NELFE-213ENST00000494956 KIAA0100Q14667 2235 aaKnown RBP12.83□□□□□ -0.36
NELFE-213ENST00000494956 EN2P19622 333 aaPredicted RBP12.83□□□□□ -0.36
NELFE-213ENST00000494956 GUCY1A2P33402 732 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 BACE1P56817 501 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 GABPAQ06546 454 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 RAB3GAP1Q15042 981 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 ARHGEF6Q15052 776 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 TTC6Q86TZ1 520 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 CERS3Q8IU89 383 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 ACER1Q8TDN7 264 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 EHD4Q9H223 541 aa12.83□□□□□ -0.36
NELFE-213ENST00000494956 USP17L10C9JJH3 530 aa12.82□□□□□ -0.36
NELFE-213ENST00000494956 MTFR1Q15390 333 aa12.82□□□□□ -0.36
NELFE-213ENST00000494956 ABCB5Q2M3G0 1257 aa12.82□□□□□ -0.36
NELFE-213ENST00000494956 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
NELFE-213ENST00000494956 CLEC10AQ8IUN9 316 aa12.82□□□□□ -0.36
NELFE-213ENST00000494956 P2RX7Q99572 595 aaKnown RBP12.82□□□□□ -0.36
NELFE-213ENST00000494956 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.82□□□□□ -0.367e-9■■■■□ 20.6
NELFE-213ENST00000494956 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
NELFE-213ENST00000494956 FCGRTP55899 365 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 SEPT2Q15019 361 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 UBE3CQ15386 1083 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 TMED8Q6PL24 325 aaPredicted RBP12.81□□□□□ -0.36
NELFE-213ENST00000494956 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 TXNRD2Q9NNW7 524 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 TMOD4Q9NZQ9 345 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 SLC4A4Q9Y6R1 1079 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 CENPFP49454 3210 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
NELFE-213ENST00000494956 USP17L12C9JPN9 530 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 USP17L21D6R901 530 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 MPHOSPH10O00566 681 aaKnown RBP12.8□□□□□ -0.36
NELFE-213ENST00000494956 IRX3P78415 501 aaPredicted RBP12.8□□□□□ -0.36
NELFE-213ENST00000494956 FAM110CQ1W6H9 321 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 STK11IPQ8N1F8 1099 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 KBTBD3Q8NAB2 608 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 FEZ1Q99689 392 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
NELFE-213ENST00000494956 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 C19orf81C9J6K1 198 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 M0R2C6 588 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 TNPO2O14787 897 aaKnown RBP12.79□□□□□ -0.36
NELFE-213ENST00000494956 GNRH1P01148 92 aa12.79□□□□□ -0.36
NELFE-213ENST00000494956 AKR1B1P15121 316 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms