RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
LIMS2-216ENST00000494613 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-216ENST00000494613 MCM9Q9NXL9 1143 aa18.86■□□□□ 0.61
LIMS2-216ENST00000494613 SRRDQ9UH36 339 aa18.86■□□□□ 0.61
LIMS2-216ENST00000494613 ZBTB21Q9ULJ3 1066 aa18.86■□□□□ 0.61
LIMS2-216ENST00000494613 POTEFA5A3E0 1075 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 PRKAB2O43741 272 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 GH2P01242 217 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 OSBPP22059 807 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 MTMR2Q13614 643 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 UBE3CQ15386 1083 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 SLC9C1Q4G0N8 1177 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 SMCR8Q8TEV9 937 aaPredicted RBP18.85■□□□□ 0.61
LIMS2-216ENST00000494613 DOCK1Q14185 1865 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 PHIPQ8WWQ0 1821 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 MAST2Q6P0Q8 1798 aa18.85■□□□□ 0.61
LIMS2-216ENST00000494613 CDK5RAP2Q96SN8 1893 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 EVX2Q03828 476 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 GABPAQ06546 454 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 PABPC4Q13310 644 aaKnown RBP eCLIP18.84■□□□□ 0.61
LIMS2-216ENST00000494613 ZSCAN25Q6NSZ9 544 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 ZNF333Q96JL9 665 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 ASCC2Q9H1I8 757 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-216ENST00000494613 TMOD4Q9NZQ9 345 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 PNMA3Q9UL41 463 aa18.84■□□□□ 0.61
LIMS2-216ENST00000494613 MBD4O95243 580 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 HOXA7P31268 230 aaPredicted RBP18.83■□□□□ 0.6
LIMS2-216ENST00000494613 SHMT1P34896 483 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 FCGRTP55899 365 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 ABCB5Q2M3G0 1257 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 TSHZ3Q63HK5 1081 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 SH3TC2Q8TF17 1288 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 P2RX7Q99572 595 aaKnown RBP18.83■□□□□ 0.6
LIMS2-216ENST00000494613 PUS7LQ9H0K6 701 aaKnown RBP18.83■□□□□ 0.6
LIMS2-216ENST00000494613 EMILIN3Q9NT22 766 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 ATP8A2Q9NTI2 1148 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 SIPA1L1O43166 1804 aa18.83■□□□□ 0.6
LIMS2-216ENST00000494613 CYP2D6P10635 497 aa18.82■□□□□ 0.6
LIMS2-216ENST00000494613 RAB3GAP1Q15042 981 aa18.82■□□□□ 0.6
LIMS2-216ENST00000494613 GPATCH3Q96I76 525 aa18.82■□□□□ 0.6
LIMS2-216ENST00000494613 TMEM106CQ9BVX2 250 aa18.82■□□□□ 0.6
LIMS2-216ENST00000494613 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
LIMS2-216ENST00000494613 GABRQQ9UN88 632 aa18.82■□□□□ 0.6
LIMS2-216ENST00000494613 FOCADQ5VW36 1801 aa18.81■□□□□ 0.6
LIMS2-216ENST00000494613 MYH1P12882 1939 aa18.81■□□□□ 0.6
LIMS2-216ENST00000494613 MYCP01106 439 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-216ENST00000494613 EN2P19622 333 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-216ENST00000494613 GCLCP48506 637 aaPredicted RBP18.81■□□□□ 0.6
LIMS2-216ENST00000494613 USP17L2Q6R6M4 530 aa18.81■□□□□ 0.6
LIMS2-216ENST00000494613 KBTBD3Q8NAB2 608 aa18.81■□□□□ 0.6
LIMS2-216ENST00000494613 RAET1EQ8TD07 263 aa18.81■□□□□ 0.6
LIMS2-216ENST00000494613 HTTP42858 3142 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 MYPNQ86TC9 1320 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 USP17L12C9JPN9 530 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 USP17L21D6R901 530 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 GUCY1A2P33402 732 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 PRKCZQ05513 592 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 DYNLL2Q96FJ2 89 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 SLC4A4Q9Y6R1 1079 aa18.8■□□□□ 0.6
LIMS2-216ENST00000494613 PTPRFP10586 1907 aa18.79■□□□□ 0.6
LIMS2-216ENST00000494613 GRK4P32298 578 aa18.79■□□□□ 0.6
LIMS2-216ENST00000494613 IRX3P78415 501 aaPredicted RBP18.79■□□□□ 0.6
LIMS2-216ENST00000494613 FAM110CQ1W6H9 321 aa18.79■□□□□ 0.6
LIMS2-216ENST00000494613 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
LIMS2-216ENST00000494613 C12orf60Q5U649 245 aa18.79■□□□□ 0.6
LIMS2-216ENST00000494613 ACER1Q8TDN7 264 aa18.79■□□□□ 0.6
LIMS2-216ENST00000494613 OTUD7AQ8TE49 926 aaPredicted RBP18.79■□□□□ 0.6
LIMS2-216ENST00000494613 STRBPQ96SI9 672 aaKnown RBP18.79■□□□□ 0.6
LIMS2-216ENST00000494613 ZSWIM8A7E2V4 1837 aa18.79■□□□□ 0.6
LIMS2-216ENST00000494613 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
LIMS2-216ENST00000494613 SMIM22K7EJ46 135 aa18.78■□□□□ 0.6
LIMS2-216ENST00000494613 TNPO2O14787 897 aaKnown RBP18.78■□□□□ 0.6
LIMS2-216ENST00000494613 TNRC18O15417 2968 aaPredicted RBP18.78■□□□□ 0.6
LIMS2-216ENST00000494613 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
LIMS2-216ENST00000494613 FLT3LGP49771 235 aa18.78■□□□□ 0.6
LIMS2-216ENST00000494613 SEPT2Q15019 361 aa18.78■□□□□ 0.6
LIMS2-216ENST00000494613 ZYXQ15942 572 aaKnown RBP18.78■□□□□ 0.6
LIMS2-216ENST00000494613 SLC44A5Q8NCS7 719 aa18.78■□□□□ 0.6
LIMS2-216ENST00000494613 OSBP2Q969R2 916 aa18.78■□□□□ 0.6
LIMS2-216ENST00000494613 TTC41PQ6P2S7 1318 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 ATAD5Q96QE3 1844 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 CENPFP49454 3210 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.6
LIMS2-216ENST00000494613 PEX10O60683 326 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 MTFR1Q15390 333 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 CTR9Q6PD62 1173 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 COA7Q96BR5 231 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 KIAA1683Q9H0B3 1180 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 RBPJLQ9UBG7 517 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 BIN2Q9UBW5 565 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-216ENST00000494613 SWAP70Q9UH65 585 aa18.77■□□□□ 0.6
LIMS2-216ENST00000494613 ERC2O15083 957 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 ADCY3O60266 1144 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 CDK8P49336 464 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 USP14P54578 494 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 HERVK_113P62684 666 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 HDAC1Q13547 482 aaPredicted RBP18.76■□□□□ 0.59
LIMS2-216ENST00000494613 Q3C1V9 767 aa18.76■□□□□ 0.59
LIMS2-216ENST00000494613 PI4K2BQ8TCG2 481 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms