RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CATIPQ7Z7H3 387 aa19.21■□□□□ 0.67
ATG4B-225ENST00000494465 RTEL1Q9NZ71 1219 aa19.21■□□□□ 0.67
ATG4B-225ENST00000494465 TSPY2A6NKD2 308 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 NT5C2P49902 561 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 FBXW7Q969H0 707 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 CNKSR1Q969H4 720 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 IL17RBQ9NRM6 502 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 DDAH1O94760 285 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 BAG6P46379 1132 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 CCDC82Q8N4S0 544 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 SLC44A5Q8NCS7 719 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 KCNQ5Q9NR82 932 aa19.2■□□□□ 0.66
ATG4B-225ENST00000494465 GOLGA6L4A6NEF3 574 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 LETM1O95202 739 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-225ENST00000494465 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-225ENST00000494465 TFAP4Q01664 338 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 AMOTL1Q8IY63 956 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 TRIM22Q8IYM9 498 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 WASF1Q92558 559 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 DBNDD1Q9H9R9 158 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 C10orf71Q711Q0 1435 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 F8W031 263 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-225ENST00000494465 DEXIO95424 95 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 U2AF2P26368 475 aaKnown RBP eCLIP19.19■□□□□ 0.668e-10■■□□□ 12.2
ATG4B-225ENST00000494465 PODNQ7Z5L7 613 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 TTF2Q9UNY4 1162 aaKnown RBP19.19■□□□□ 0.66
ATG4B-225ENST00000494465 CLIC4Q9Y696 253 aa19.19■□□□□ 0.66
ATG4B-225ENST00000494465 CALM1P0DP23 149 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 CALM2P0DP24 149 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 CALM3P0DP25 149 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 RNF26Q9BY78 433 aaPredicted RBP19.18■□□□□ 0.66
ATG4B-225ENST00000494465 TSPY26PQ9H489 355 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 POLR3EQ9NVU0 708 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
ATG4B-225ENST00000494465 PLEKHA8P1O95397 391 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 RASA1P20936 1047 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 LINC00301Q8NCQ3 95 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 ANKS1AQ92625 1134 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 FUCA2Q9BTY2 467 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 MKNK2Q9HBH9 465 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 RBM28Q9NW13 759 aaKnown RBP19.18■□□□□ 0.66
ATG4B-225ENST00000494465 DACT1Q9NYF0 836 aa19.18■□□□□ 0.66
ATG4B-225ENST00000494465 SF3B2Q13435 895 aaKnown RBP19.17■□□□□ 0.66
ATG4B-225ENST00000494465 C16orf86Q6ZW13 317 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 KLHL34Q8N239 644 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 NR1I2O75469 434 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 TRIM29Q14134 588 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 PKN1Q16512 942 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 BICD2Q8TD16 824 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 SHISA4Q96DD7 197 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
ATG4B-225ENST00000494465 G3V3G9 751 aa19.16■□□□□ 0.66
ATG4B-225ENST00000494465 MMP1P03956 469 aa19.16■□□□□ 0.66
ATG4B-225ENST00000494465 DCAF8Q5TAQ9 597 aa19.16■□□□□ 0.66
ATG4B-225ENST00000494465 TMTC3Q6ZXV5 915 aa19.16■□□□□ 0.66
ATG4B-225ENST00000494465 DGKHQ86XP1 1220 aa19.16■□□□□ 0.66
ATG4B-225ENST00000494465 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.16■□□□□ 0.66
ATG4B-225ENST00000494465 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
ATG4B-225ENST00000494465 USP17L3A6NCW0 530 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 USP17L4A6NCW7 530 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 YEATS4O95619 227 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 CDK8P49336 464 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 SCNN1DP51172 638 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 USP17L1Q7RTZ2 530 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 ECE2O60344 883 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 WDHD1O75717 1129 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-225ENST00000494465 HHIPL2Q6UWX4 724 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 DDX19AQ9NUU7 478 aaKnown RBP19.15■□□□□ 0.66
ATG4B-225ENST00000494465 PCDHA7Q9UN72 937 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 KCNJ14Q9UNX9 436 aa19.15■□□□□ 0.66
ATG4B-225ENST00000494465 CNTNAP5Q8WYK1 1306 aa19.14■□□□□ 0.66
ATG4B-225ENST00000494465 PRPF3O43395 683 aaKnown RBP19.14■□□□□ 0.66
ATG4B-225ENST00000494465 ANO1Q5XXA6 986 aa19.14■□□□□ 0.66
ATG4B-225ENST00000494465 ZNF444Q8N0Y2 327 aaPredicted RBP19.14■□□□□ 0.66
ATG4B-225ENST00000494465 NUP62CLQ9H1M0 184 aa19.14■□□□□ 0.66
ATG4B-225ENST00000494465 GOLPH3LQ9H4A5 285 aa19.14■□□□□ 0.66
ATG4B-225ENST00000494465 DDX4Q9NQI0 724 aaKnown RBP19.14■□□□□ 0.66
ATG4B-225ENST00000494465 BAZ2BQ9UIF8 2168 aaKnown RBP19.14■□□□□ 0.65
ATG4B-225ENST00000494465 TSPY3P0CV98 308 aa19.14■□□□□ 0.65
ATG4B-225ENST00000494465 TSPY8P0CW00 308 aa19.14■□□□□ 0.65
ATG4B-225ENST00000494465 FKBP1AP62942 108 aaKnown RBP19.14■□□□□ 0.65
ATG4B-225ENST00000494465 DACT2Q5SW24 774 aa19.14■□□□□ 0.65
ATG4B-225ENST00000494465 STRIP1Q5VSL9 837 aa19.14■□□□□ 0.65
ATG4B-225ENST00000494465 APOBEC3HQ6NTF7 200 aaKnown RBP19.14■□□□□ 0.65
ATG4B-225ENST00000494465 SRBD1Q8N5C6 995 aaKnown RBP19.14■□□□□ 0.65
ATG4B-225ENST00000494465 KIF13BQ9NQT8 1826 aa19.14■□□□□ 0.65
ATG4B-225ENST00000494465 ME1P48163 572 aa19.13■□□□□ 0.65
ATG4B-225ENST00000494465 RBM43Q6ZSC3 357 aaKnown RBP19.13■□□□□ 0.65
ATG4B-225ENST00000494465 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
ATG4B-225ENST00000494465 CTCFLQ8NI51 663 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-225ENST00000494465 CLSTN2Q9H4D0 955 aa19.13■□□□□ 0.65
ATG4B-225ENST00000494465 BTBD18B2RXH4 712 aa19.13■□□□□ 0.65
ATG4B-225ENST00000494465 STK38Q15208 465 aa19.13■□□□□ 0.65
ATG4B-225ENST00000494465 AOC3Q16853 763 aa19.13■□□□□ 0.65
ATG4B-225ENST00000494465 KCNG4Q8TDN1 519 aa19.13■□□□□ 0.65
ATG4B-225ENST00000494465 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
ATG4B-225ENST00000494465 V9GY48 417 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-225ENST00000494465 KIAA2012Q0VF49 1180 aa19.12■□□□□ 0.65
ATG4B-225ENST00000494465 SNW1Q13573 536 aaKnown RBP19.12■□□□□ 0.65
ATG4B-225ENST00000494465 CAMK4Q16566 473 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms