RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 CRACR2BQ8N4Y2 399 aaPredicted RBP14.3□□□□□ -0.12
PHF3-205ENST00000494284 TMX1Q9H3N1 280 aa14.3□□□□□ -0.12
PHF3-205ENST00000494284 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
PHF3-205ENST00000494284 ERICH2A1L162 156 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 TRIM29Q14134 588 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 SEC23AQ15436 765 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 FBXO33Q7Z6M2 555 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 GNL3LQ9NVN8 582 aaKnown RBP14.29□□□□□ -0.12
PHF3-205ENST00000494284 SAP30BPQ9UHR5 308 aaKnown RBP14.29□□□□□ -0.12
PHF3-205ENST00000494284 COBLO75128 1261 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 SLURP2P0DP57 97 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 MEX3CQ5U5Q3 659 aaKnown RBP14.29□□□□□ -0.12
PHF3-205ENST00000494284 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 BRAPQ7Z569 592 aa14.29□□□□□ -0.12
PHF3-205ENST00000494284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
PHF3-205ENST00000494284 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 FAM177A1Q8N128 213 aaPredicted RBP14.28□□□□□ -0.12
PHF3-205ENST00000494284 DPF2Q92785 391 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
PHF3-205ENST00000494284 A0A1B0GUL6 1792 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 WDR19Q8NEZ3 1342 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 RTL9Q8NET4 1388 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 YEATS4O95619 227 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 MMP1P03956 469 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 IFNAR1P17181 557 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 CPLX2Q6PUV4 134 aaKnown RBP14.28□□□□□ -0.12
PHF3-205ENST00000494284 NOSTRINQ8IVI9 506 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 STAMQ92783 540 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 ZSCAN10Q96SZ4 725 aaPredicted RBP14.28□□□□□ -0.12
PHF3-205ENST00000494284 NAT10Q9H0A0 1025 aaKnown RBP14.28□□□□□ -0.12
PHF3-205ENST00000494284 CNNM2Q9H8M5 875 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 CNTNAP4Q9C0A0 1308 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 PKN1Q16512 942 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 IFIT1BQ5T764 474 aaKnown RBP14.28□□□□□ -0.12
PHF3-205ENST00000494284 CEP135Q66GS9 1140 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
PHF3-205ENST00000494284 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
PHF3-205ENST00000494284 ZNF831Q5JPB2 1677 aa14.27□□□□□ -0.12
PHF3-205ENST00000494284 CDKL5O76039 1030 aa14.27□□□□□ -0.12
PHF3-205ENST00000494284 METTL16Q86W50 562 aaKnown RBP14.27□□□□□ -0.12
PHF3-205ENST00000494284 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.12
PHF3-205ENST00000494284 PDCL2Q8N4E4 241 aa14.27□□□□□ -0.12
PHF3-205ENST00000494284 SH3RF3Q8TEJ3 882 aaPredicted RBP14.27□□□□□ -0.12
PHF3-205ENST00000494284 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 BMP6P22004 513 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 CCZ1BP86790 482 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 CCZ1P86791 482 aaPredicted RBP14.27□□□□□ -0.13
PHF3-205ENST00000494284 PDE4BQ07343 736 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 SART3Q15020 963 aaKnown RBP14.27□□□□□ -0.13
PHF3-205ENST00000494284 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 CCDC112Q8NEF3 446 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 ESR2Q92731 530 aa14.27□□□□□ -0.13
PHF3-205ENST00000494284 GNAT2P19087 354 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 TRAPPC3LQ5T215 181 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.26□□□□□ -0.13
PHF3-205ENST00000494284 ZBTB9Q96C00 473 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 MRFAP1L1Q96HT8 127 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 A0A1W2PQ27 194 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 A0A1W2PQ64 194 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 A0A1W2PQD8 194 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 TMEM232C9JQI7 657 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 SERPINC1P01008 464 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 CMA1P23946 247 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 PTPN14Q15678 1187 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 SEPT12Q8IYM1 358 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 CNNM3Q8NE01 707 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
PHF3-205ENST00000494284 CDC25AP30304 524 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 CFAP100Q494V2 611 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 DZIP1Q86YF9 867 aaKnown RBP14.25□□□□□ -0.13
PHF3-205ENST00000494284 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 STAG2Q8N3U4 1231 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 SRBD1Q8N5C6 995 aaKnown RBP14.25□□□□□ -0.13
PHF3-205ENST00000494284 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
PHF3-205ENST00000494284 EPSTI1Q96J88 318 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 MXD3Q9BW11 206 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 A0A087X0B3 334 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 POLR2DO15514 142 aaKnown RBP14.25□□□□□ -0.13
PHF3-205ENST00000494284 TRIM37O94972 964 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 PLCD1P51178 756 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 AFF2P51816 1311 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 NCBP1Q09161 790 aaKnown RBP14.25□□□□□ -0.13
PHF3-205ENST00000494284 TROAPQ12815 778 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 MAPKAPK5Q8IW41 473 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 TGFBRAP1Q8WUH2 860 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 GJD4Q96KN9 370 aaPredicted RBP14.25□□□□□ -0.13
PHF3-205ENST00000494284 THSD7AQ9UPZ6 1657 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 PCDHA5Q9Y5H7 936 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 SCN7AQ01118 1682 aa14.25□□□□□ -0.13
PHF3-205ENST00000494284 F8W031 263 aaPredicted RBP14.24□□□□□ -0.13
PHF3-205ENST00000494284 GOLGA8HP0CJ92 632 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 HSPA1LP34931 641 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 GPSM2P81274 684 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 ZNF174Q15697 407 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 ATL3Q6DD88 541 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 PRR5LQ6MZQ0 368 aa14.24□□□□□ -0.13
PHF3-205ENST00000494284 SARM1Q6SZW1 724 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms