RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 LRIG2O94898 1065 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 MCM4P33991 863 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 CAP2P40123 477 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 CLCQ05315 142 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 DUSP27Q5VZP5 1158 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 GK5Q6ZS86 529 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 SLITRK4Q8IW52 837 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 RIN3Q8TB24 985 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 TGIF2Q9GZN2 237 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 ADAM30Q9UKF2 790 aa9.42□□□□□ -0.9
MSL3-217ENST00000494268 DNAJA2O60884 412 aa9.41□□□□□ -0.9
MSL3-217ENST00000494268 CST3P01034 146 aaPredicted RBP9.41□□□□□ -0.9
MSL3-217ENST00000494268 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
MSL3-217ENST00000494268 TMEM201Q5SNT2 666 aa9.41□□□□□ -0.9
MSL3-217ENST00000494268 MRPL41Q8IXM3 137 aaKnown RBP9.41□□□□□ -0.9
MSL3-217ENST00000494268 GIMAP7Q8NHV1 300 aa9.41□□□□□ -0.9
MSL3-217ENST00000494268 CHURC1-FNTBB4DL54 471 aa9.4□□□□□ -0.9
MSL3-217ENST00000494268 SLITRK5O94991 958 aa9.4□□□□□ -0.9
MSL3-217ENST00000494268 SLC6A19Q695T7 634 aa9.4□□□□□ -0.9
MSL3-217ENST00000494268 KLHL3Q9UH77 587 aa9.4□□□□□ -0.9
MSL3-217ENST00000494268 RNF112Q9ULX5 631 aa9.4□□□□□ -0.9
MSL3-217ENST00000494268 LEMD3Q9Y2U8 911 aa9.4□□□□□ -0.9
MSL3-217ENST00000494268 CNTNAP4Q9C0A0 1308 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 MED26O95402 600 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 CYP27A1Q02318 531 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 FAM214BQ7L5A3 538 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 CCSER2Q9H7U1 834 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 EHMT1Q9H9B1 1298 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 LRRC4CQ9HCJ2 640 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
MSL3-217ENST00000494268 ATE1O95260 518 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 EOMESO95936 686 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 ZNF165P49910 485 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 CYP27C1Q4G0S4 372 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 REXO1Q8N1G1 1221 aaKnown RBP9.38□□□□□ -0.91
MSL3-217ENST00000494268 MFSD2AQ8NA29 543 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 FAM13CQ8NE31 585 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 HEXIM2Q96MH2 286 aaKnown RBP9.38□□□□□ -0.91
MSL3-217ENST00000494268 MIPEPQ99797 713 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 METTL22Q9BUU2 404 aaPredicted RBP9.38□□□□□ -0.91
MSL3-217ENST00000494268 ANTXR1Q9H6X2 564 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 U3KQE9 123 aa9.38□□□□□ -0.91
MSL3-217ENST00000494268 SLC22A31A6NKX4 558 aa9.37□□□□□ -0.91
MSL3-217ENST00000494268 GPRASP2Q96D09 838 aa9.37□□□□□ -0.91
MSL3-217ENST00000494268 GINM1Q9NU53 330 aa9.37□□□□□ -0.91
MSL3-217ENST00000494268 INPP5FQ9Y2H2 1132 aa9.37□□□□□ -0.91
MSL3-217ENST00000494268 CYP26A1O43174 497 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 SSTR4P31391 388 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 GJA8P48165 433 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 LETMD1Q6P1Q0 360 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 CDH24Q86UP0 819 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 FAM181AQ8N9Y4 354 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 PPT2Q9UMR5 302 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 EFR3BQ9Y2G0 817 aa9.36□□□□□ -0.91
MSL3-217ENST00000494268 FOSL1P15407 271 aa9.35□□□□□ -0.91
MSL3-217ENST00000494268 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
MSL3-217ENST00000494268 COBLO75128 1261 aa9.34□□□□□ -0.91
MSL3-217ENST00000494268 ARSHQ5FYA8 562 aa9.34□□□□□ -0.91
MSL3-217ENST00000494268 SLFN12Q8IYM2 578 aa9.34□□□□□ -0.91
MSL3-217ENST00000494268 RASGRP4Q8TDF6 673 aa9.34□□□□□ -0.91
MSL3-217ENST00000494268 CAPN10Q9HC96 672 aa9.34□□□□□ -0.91
MSL3-217ENST00000494268 ZC3H7BQ9UGR2 993 aaKnown RBP9.34□□□□□ -0.91
MSL3-217ENST00000494268 MLECQ14165 292 aa9.33□□□□□ -0.92
MSL3-217ENST00000494268 CPSF6Q16630 551 aaKnown RBP eCLIP9.33□□□□□ -0.92
MSL3-217ENST00000494268 BAHD1Q8TBE0 780 aaPredicted RBP9.33□□□□□ -0.92
MSL3-217ENST00000494268 PPP1R13LQ8WUF5 828 aa9.33□□□□□ -0.92
MSL3-217ENST00000494268 GMIPQ9P107 970 aa9.33□□□□□ -0.92
MSL3-217ENST00000494268 TPX2Q9ULW0 747 aaKnown RBP9.33□□□□□ -0.92
MSL3-217ENST00000494268 CD97P48960 835 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 FBXW10Q5XX13 1052 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 OVOS1Q6IE37 1185 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 CCDC81Q6ZN84 652 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 DNAJB8Q8NHS0 232 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 ATG4CQ96DT6 458 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 KIF2CQ99661 725 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 CEP131Q9UPN4 1083 aa9.32□□□□□ -0.92
MSL3-217ENST00000494268 GRIK1P39086 918 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 SOX9P48436 509 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 OXCT1P55809 520 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 CYB5D2Q8WUJ1 264 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 FERD3LQ96RJ6 166 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 PRDM5Q9NQX1 630 aaPredicted RBP9.31□□□□□ -0.92
MSL3-217ENST00000494268 GTF2IRD1Q9UHL9 959 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 ZNRF3Q9ULT6 936 aa9.31□□□□□ -0.92
MSL3-217ENST00000494268 PRR33A8MZF0 331 aa9.3□□□□□ -0.92
MSL3-217ENST00000494268 HYAL3O43820 417 aaPredicted RBP9.3□□□□□ -0.92
MSL3-217ENST00000494268 POLR2BP30876 1174 aaKnown RBP9.3□□□□□ -0.92
MSL3-217ENST00000494268 NASPP49321 788 aaPredicted RBP9.3□□□□□ -0.92
MSL3-217ENST00000494268 MSMPQ1L6U9 139 aa9.3□□□□□ -0.92
MSL3-217ENST00000494268 INTS5Q6P9B9 1019 aaKnown RBP9.3□□□□□ -0.92
MSL3-217ENST00000494268 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
MSL3-217ENST00000494268 PLD6Q8N2A8 252 aaKnown RBP9.3□□□□□ -0.92
MSL3-217ENST00000494268 SPATA32Q96LK8 384 aa9.3□□□□□ -0.92
MSL3-217ENST00000494268 CNNM2Q9H8M5 875 aa9.3□□□□□ -0.92
MSL3-217ENST00000494268 PLAGL2Q9UPG8 496 aa9.3□□□□□ -0.92
MSL3-217ENST00000494268 IGF2BP3O00425 579 aaKnown RBP eCLIP9.29□□□□□ -0.92
MSL3-217ENST00000494268 CDCP2Q5VXM1 449 aa9.29□□□□□ -0.92
MSL3-217ENST00000494268 TMEM40Q8WWA1 233 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms