RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ARHGEF35A5YM69 484 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 TNFAIP3P21580 790 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 MAP7D1Q3KQU3 841 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
COL27A1-207ENST00000494090 UBLCP1Q8WVY7 318 aaPredicted RBP21.34■■□□□ 1.01
COL27A1-207ENST00000494090 H0YIN7 160 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 GTF2A1P52655 376 aaPredicted RBP21.34■■□□□ 1.01
COL27A1-207ENST00000494090 MYSM1Q5VVJ2 828 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 SAMD15Q9P1V8 674 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 ATP5DP30049 168 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 TXKP42681 527 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 IGSF3O75054 1194 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
COL27A1-207ENST00000494090 PTH1RQ03431 593 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 DDX23Q9BUQ8 820 aaKnown RBP21.33■■□□□ 1.01
COL27A1-207ENST00000494090 SMIM23A6NLE4 172 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 ZBED4O75132 1171 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 KRT9P35527 623 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 ADCY7P51828 1080 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 ASIC2Q16515 512 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 GABPB2Q8TAK5 448 aaPredicted RBP21.33■■□□□ 1.01
COL27A1-207ENST00000494090 ANAPC4Q9UJX5 808 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 GJA3Q9Y6H8 435 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 ARHGEF5Q12774 1597 aa21.33■■□□□ 1.01
COL27A1-207ENST00000494090 RGS12O14924 1447 aa21.33■■□□□ 1
COL27A1-207ENST00000494090 FAM135BQ49AJ0 1406 aa21.33■■□□□ 1
COL27A1-207ENST00000494090 FCHSD1Q86WN1 690 aa21.33■■□□□ 1
COL27A1-207ENST00000494090 PLEKHF1Q96S99 279 aa21.33■■□□□ 1
COL27A1-207ENST00000494090 KRT5P13647 590 aa21.33■■□□□ 1
COL27A1-207ENST00000494090 GPHNQ9NQX3 736 aaPredicted RBP21.33■■□□□ 1
COL27A1-207ENST00000494090 NOD1Q9Y239 953 aa21.33■■□□□ 1
COL27A1-207ENST00000494090 MAGI2Q86UL8 1455 aa21.33■■□□□ 1
COL27A1-207ENST00000494090 TRPC3Q13507 836 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 AKNAD1Q5T1N1 836 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 CCDC25Q86WR0 208 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 PALD1Q9ULE6 856 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 KCNJ14Q9UNX9 436 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 MTMR6Q9Y217 621 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 CCDC169A6NNP5 214 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 PFKFB2O60825 505 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 GIGYF1O75420 1035 aaPredicted RBP21.32■■□□□ 1
COL27A1-207ENST00000494090 TAF5LO75529 589 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 TTC31Q49AM3 519 aaPredicted RBP21.32■■□□□ 1
COL27A1-207ENST00000494090 TAB2Q9NYJ8 693 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 MTX1Q13505 466 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 ORAI2Q96SN7 254 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 KIAA1468Q9P260 1216 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 LRWD1Q9UFC0 647 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 A6NNZ2 444 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 ARID4AP29374 1257 aaPredicted RBP21.32■■□□□ 1
COL27A1-207ENST00000494090 GABPB1Q06547 395 aaPredicted RBP21.32■■□□□ 1
COL27A1-207ENST00000494090 TUBB8Q3ZCM7 444 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 SLC9C1Q4G0N8 1177 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 CCDC114Q96M63 670 aa21.32■■□□□ 1
COL27A1-207ENST00000494090 A0A0D9SFI3 127 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 XPO4Q9C0E2 1151 aaKnown RBP21.31■■□□□ 1
COL27A1-207ENST00000494090 ERCC5P28715 1186 aaPredicted RBP21.31■■□□□ 1
COL27A1-207ENST00000494090 SLC1A4P43007 532 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 NELFBQ8WX92 580 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 SPOPO43791 374 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 IFT20Q8IY31 132 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 IL17REQ8NFR9 667 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 1
COL27A1-207ENST00000494090 NOP56O00567 594 aaKnown RBP21.31■■□□□ 1
COL27A1-207ENST00000494090 KCNK9Q9NPC2 374 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 ZNF500O60304 480 aaPredicted RBP21.31■■□□□ 1
COL27A1-207ENST00000494090 BEND3Q5T5X7 828 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 LARGE2Q8N3Y3 721 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 EAF2Q96CJ1 260 aaPredicted RBP21.31■■□□□ 1
COL27A1-207ENST00000494090 TPCN1Q9ULQ1 816 aa21.31■■□□□ 1
COL27A1-207ENST00000494090 MCTP2Q6DN12 878 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 IQCDQ96DY2 449 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 CCDC51Q96ER9 411 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 FAM204AQ9H8W3 233 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 DTNBO60941 627 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 HSPA2P54652 639 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 CLUL1Q15846 466 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 BIN2Q9UBW5 565 aaPredicted RBP21.3■■□□□ 1
COL27A1-207ENST00000494090 STAP2Q9UGK3 403 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 ALDH1B1P30837 517 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 ZBTB9Q96C00 473 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 ODF2LQ9ULJ1 636 aa21.3■■□□□ 1
COL27A1-207ENST00000494090 ACTN4O43707 911 aaKnown RBP21.29■■□□□ 1
COL27A1-207ENST00000494090 PFKFB1P16118 471 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 PNOCQ13519 176 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 SETDB1Q15047 1291 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 B4GALNT4Q76KP1 1039 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 SNX29Q8TEQ0 813 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 EDC3Q96F86 508 aaKnown RBP21.29■■□□□ 1
COL27A1-207ENST00000494090 TCIRG1Q13488 830 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 CCDC110Q8TBZ0 833 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 TRIM7Q9C029 511 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 PKD2L1Q9P0L9 805 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 SERTAD1Q9UHV2 236 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 AGTPBP1Q9UPW5 1226 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 UTP14CQ5TAP6 766 aaKnown RBP21.29■■□□□ 1
COL27A1-207ENST00000494090 KRBA2Q6ZNG9 492 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.29■■□□□ 13e-7■■□□□ 11.7
COL27A1-207ENST00000494090 UBL4BQ8N7F7 174 aa21.29■■□□□ 1
COL27A1-207ENST00000494090 HAUS7Q99871 368 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms