RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 FOXP4Q8IVH2 680 aaPredicted RBP10.38□□□□□ -0.75
LRCH3-219ENST00000494069 CRACR2BQ8N4Y2 399 aaPredicted RBP10.38□□□□□ -0.75
LRCH3-219ENST00000494069 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 ZNF333Q96JL9 665 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 RIOK1Q9BRS2 568 aaKnown RBP10.38□□□□□ -0.75
LRCH3-219ENST00000494069 AGTPBP1Q9UPW5 1226 aa10.38□□□□□ -0.75
LRCH3-219ENST00000494069 MKI67P46013 3256 aaKnown RBP10.38□□□□□ -0.75
LRCH3-219ENST00000494069 ZNF532Q9HCE3 1301 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 PTPRFP10586 1907 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 MAGEB6P1A0A0J9YX57 407 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 PEX10O60683 326 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 IGSF3O75054 1194 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 PLCD1P51178 756 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 ARHGEF6Q15052 776 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 SLC9C1Q4G0N8 1177 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
LRCH3-219ENST00000494069 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.37□□□□□ -0.75
LRCH3-219ENST00000494069 CHMP4BQ9H444 224 aaKnown RBP10.37□□□□□ -0.75
LRCH3-219ENST00000494069 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
LRCH3-219ENST00000494069 FOCADQ5VW36 1801 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 SMIM22K7EJ46 135 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 PRKAB2O43741 272 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 HLA-DOAP06340 250 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 CYP2D6P10635 497 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 ATP5JP18859 108 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 PRKCZQ05513 592 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 MTMR2Q13614 643 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
LRCH3-219ENST00000494069 SH3D19Q5HYK7 790 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 TSHZ3Q63HK5 1081 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 LCORLQ8N3X6 602 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 ANKRD13CQ8N6S4 541 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 HAUS7Q99871 368 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 WDR18Q9BV38 432 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 PAG1Q9NWQ8 432 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 SRRDQ9UH36 339 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 ZBTB21Q9ULJ3 1066 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 SLC45A1Q9Y2W3 748 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 PCDHB15Q9Y5E8 787 aa10.36□□□□□ -0.75
LRCH3-219ENST00000494069 KIAA0100Q14667 2235 aaKnown RBP10.35□□□□□ -0.75
LRCH3-219ENST00000494069 MYPNQ86TC9 1320 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 ATAD5Q96QE3 1844 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 GH2P01242 217 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 ASNSP08243 561 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 ADD2P35612 726 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 MTFR1Q15390 333 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 TATDN1Q6P1N9 297 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 PROCA1Q8NCQ7 364 aaPredicted RBP10.35□□□□□ -0.75
LRCH3-219ENST00000494069 SMCR8Q8TEV9 937 aaPredicted RBP10.35□□□□□ -0.75
LRCH3-219ENST00000494069 SDR42E1Q8WUS8 393 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
LRCH3-219ENST00000494069 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 ASCC2Q9H1I8 757 aaPredicted RBP10.35□□□□□ -0.75
LRCH3-219ENST00000494069 DCTPP1Q9H773 170 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 ARMT1Q9H993 441 aa10.35□□□□□ -0.75
LRCH3-219ENST00000494069 GNRH1P01148 92 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 GUCY1A2P33402 732 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 SHMT1P34896 483 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 PRMT2P55345 433 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 FCGRTP55899 365 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 BACE1P56817 501 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 NBPF11Q86T75 865 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 SLC44A5Q8NCS7 719 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 ACER1Q8TDN7 264 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 AS3MTQ9HBK9 375 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 EMILIN3Q9NT22 766 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 MCM9Q9NXL9 1143 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 SERPINB13Q9UIV8 391 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 MYH1P12882 1939 aa10.34□□□□□ -0.75
LRCH3-219ENST00000494069 USP17L10C9JJH3 530 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 MBD4O95243 580 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 POLR3DP05423 398 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 HOXD10P28358 340 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 GRK4P32298 578 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 FLT3LGP49771 235 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 RRP1P56182 461 aaKnown RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 GABPAQ06546 454 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 ZYXQ15942 572 aaKnown RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 CERKLQ49MI3 558 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 TMED8Q6PL24 325 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 CERS3Q8IU89 383 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 CRBNQ96SW2 442 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 P2RX7Q99572 595 aaKnown RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 TMEM106CQ9BVX2 250 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 CRNKL1Q9BZJ0 848 aaKnown RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 EHD4Q9H223 541 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 DCP1AQ9NPI6 582 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-219ENST00000494069 TMOD4Q9NZQ9 345 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 PNMA3Q9UL41 463 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 LOC285556D6RIA3 1793 aa10.33□□□□□ -0.76
LRCH3-219ENST00000494069 PDE4DIPQ5VU43 2346 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 CYP2D7A0A087X1C5 515 aa10.32□□□□□ -0.76
LRCH3-219ENST00000494069 C19orf81C9J6K1 198 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms