RNA–Protein interactions for RNA: ENST00000494057.5

NICN1-206, Transcript of nicolin 1, humanhuman

TSL 2

Gene NICN1, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-206ENST00000494057 CCAR1Q8IX12 1150 aaKnown RBP18.48■□□□□ 0.55
NICN1-206ENST00000494057 SH3RF3Q8TEJ3 882 aaPredicted RBP18.48■□□□□ 0.55
NICN1-206ENST00000494057 GTF3C2Q8WUA4 911 aaPredicted RBP18.48■□□□□ 0.55
NICN1-206ENST00000494057 P2RX7Q99572 595 aaKnown RBP18.48■□□□□ 0.55
NICN1-206ENST00000494057 MTMR10Q9NXD2 777 aa18.48■□□□□ 0.55
NICN1-206ENST00000494057 LRP2BPQ9P2M1 347 aa18.48■□□□□ 0.55
NICN1-206ENST00000494057 C19orf81C9J6K1 198 aa18.47■□□□□ 0.55
NICN1-206ENST00000494057 BAG3O95817 575 aa18.47■□□□□ 0.55
NICN1-206ENST00000494057 COL6A1P12109 1028 aa18.47■□□□□ 0.55
NICN1-206ENST00000494057 PLCG2P16885 1265 aa18.47■□□□□ 0.55
NICN1-206ENST00000494057 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
NICN1-206ENST00000494057 TXNRD2Q9NNW7 524 aa18.47■□□□□ 0.55
NICN1-206ENST00000494057 GINM1Q9NU53 330 aa18.47■□□□□ 0.55
NICN1-206ENST00000494057 USP17L10C9JJH3 530 aa18.46■□□□□ 0.55
NICN1-206ENST00000494057 RGS2P41220 211 aa18.46■□□□□ 0.55
NICN1-206ENST00000494057 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
NICN1-206ENST00000494057 ERVK-24P63145 666 aa18.46■□□□□ 0.55
NICN1-206ENST00000494057 CACNB2Q08289 660 aaPredicted RBP18.46■□□□□ 0.55
NICN1-206ENST00000494057 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
NICN1-206ENST00000494057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.46■□□□□ 0.55
NICN1-206ENST00000494057 SPTBN5Q9NRC6 3674 aaKnown RBP18.45■□□□□ 0.54
NICN1-206ENST00000494057 PEX10O60683 326 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 MCAMP43121 646 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
NICN1-206ENST00000494057 METTL16Q86W50 562 aaKnown RBP18.45■□□□□ 0.54
NICN1-206ENST00000494057 CRACR2BQ8N4Y2 399 aaPredicted RBP18.45■□□□□ 0.54
NICN1-206ENST00000494057 USP6NLQ92738 828 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 APBA2Q99767 749 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 AATFQ9NY61 560 aaKnown RBP eCLIP18.45■□□□□ 0.54
NICN1-206ENST00000494057 RBPJLQ9UBG7 517 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 CDH23Q9H251 3354 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 FLT1P17948 1338 aa18.45■□□□□ 0.54
NICN1-206ENST00000494057 PRUNE2Q8WUY3 3088 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 LRRC26Q2I0M4 334 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 MORN1Q5T089 497 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 LHX8Q68G74 356 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 GPR142Q7Z601 462 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 PLEKHH3Q7Z736 793 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 FOXP4Q8IVH2 680 aaPredicted RBP18.44■□□□□ 0.54
NICN1-206ENST00000494057 TRMT2AQ8IZ69 625 aaKnown RBP18.44■□□□□ 0.54
NICN1-206ENST00000494057 DNAJC18Q9H819 358 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
NICN1-206ENST00000494057 ZNF316A6NFI3 1004 aaPredicted RBP18.43■□□□□ 0.54
NICN1-206ENST00000494057 GDF11O95390 407 aa18.43■□□□□ 0.54
NICN1-206ENST00000494057 CCND3P30281 292 aaPredicted RBP18.43■□□□□ 0.54
NICN1-206ENST00000494057 JAG1P78504 1218 aa18.43■□□□□ 0.54
NICN1-206ENST00000494057 MAPKAPK5Q8IW41 473 aa18.43■□□□□ 0.54
NICN1-206ENST00000494057 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
NICN1-206ENST00000494057 PAGR1Q9BTK6 254 aa18.43■□□□□ 0.54
NICN1-206ENST00000494057 PORCNQ9H237 461 aa18.43■□□□□ 0.54
NICN1-206ENST00000494057 CWC22Q9HCG8 908 aaKnown RBP18.43■□□□□ 0.54
NICN1-206ENST00000494057 ZBTB21Q9ULJ3 1066 aa18.43■□□□□ 0.54
NICN1-206ENST00000494057 MAST2Q6P0Q8 1798 aa18.42■□□□□ 0.54
NICN1-206ENST00000494057 PPP4CP60510 307 aa18.42■□□□□ 0.54
NICN1-206ENST00000494057 MDM2Q00987 491 aaPredicted RBP18.42■□□□□ 0.54
NICN1-206ENST00000494057 CCL14Q16627 93 aa18.42■□□□□ 0.54
NICN1-206ENST00000494057 Q3C1V9 767 aa18.42■□□□□ 0.54
NICN1-206ENST00000494057 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
NICN1-206ENST00000494057 ARHGAP45Q92619 1136 aa18.42■□□□□ 0.54
NICN1-206ENST00000494057 HLA-DOAP06340 250 aa18.41■□□□□ 0.54
NICN1-206ENST00000494057 G3BP1Q13283 466 aaKnown RBP eCLIP18.41■□□□□ 0.54
NICN1-206ENST00000494057 SHROOM1Q2M3G4 852 aaPredicted RBP18.41■□□□□ 0.54
NICN1-206ENST00000494057 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
NICN1-206ENST00000494057 PALD1Q9ULE6 856 aa18.41■□□□□ 0.54
NICN1-206ENST00000494057 IGSF3O75054 1194 aa18.4■□□□□ 0.54
NICN1-206ENST00000494057 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
NICN1-206ENST00000494057 GNAI2P04899 355 aa18.4■□□□□ 0.54
NICN1-206ENST00000494057 CCNA1P78396 465 aa18.4■□□□□ 0.54
NICN1-206ENST00000494057 MAP2K5Q13163 448 aa18.4■□□□□ 0.54
NICN1-206ENST00000494057 TTC39AQ5SRH9 613 aa18.4■□□□□ 0.54
NICN1-206ENST00000494057 FAM109BQ6ICB4 259 aaPredicted RBP18.4■□□□□ 0.54
NICN1-206ENST00000494057 LBHD1Q9BQE6 289 aaPredicted RBP18.4■□□□□ 0.54
NICN1-206ENST00000494057 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
NICN1-206ENST00000494057 RABGAP1Q9Y3P9 1069 aa18.4■□□□□ 0.54
NICN1-206ENST00000494057 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.53
NICN1-206ENST00000494057 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
NICN1-206ENST00000494057 EDC3Q96F86 508 aaKnown RBP18.39■□□□□ 0.53
NICN1-206ENST00000494057 SNRKQ9NRH2 765 aa18.39■□□□□ 0.53
NICN1-206ENST00000494057 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 MSCO60682 206 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 CCDC158Q5M9N0 1113 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 POTEEQ6S8J3 1075 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 ADGRA1Q86SQ6 560 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.38■□□□□ 0.53
NICN1-206ENST00000494057 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 FEZ1Q99689 392 aa18.38■□□□□ 0.53
NICN1-206ENST00000494057 SENP6Q9GZR1 1112 aaPredicted RBP18.38■□□□□ 0.53
NICN1-206ENST00000494057 SAP30BPQ9UHR5 308 aaKnown RBP18.38■□□□□ 0.53
NICN1-206ENST00000494057 FOCADQ5VW36 1801 aa18.37■□□□□ 0.53
NICN1-206ENST00000494057 PNMA6EA0A0J9YXQ4 647 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms