RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 FAM161BQ96MY7 647 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 SLC45A1Q9Y2W3 748 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 PFASO15067 1338 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 LTBP2Q14767 1821 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 TNFRSF10AO00220 468 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 C7P10643 843 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 TTC22Q5TAA0 569 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 MRIQ9BWK5 157 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 RAPGEFL1Q9UHV5 662 aa12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 DDX49Q9Y6V7 483 aaKnown RBP12.68□□□□□ -0.38
PDLIM1-205ENST00000493949 FRMPD3Q5JV73 1810 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 HMGCRP04035 888 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 COL6A1P12109 1028 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 CACNB3P54284 484 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 COA7Q96BR5 231 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 FAM122AQ96E09 287 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 IL17RAQ96F46 866 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 SEMA6BQ9H3T3 888 aa12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 HMX1Q9NP08 348 aaPredicted RBP12.67□□□□□ -0.38
PDLIM1-205ENST00000493949 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
PDLIM1-205ENST00000493949 GRIK5Q16478 980 aa12.66□□□□□ -0.38
PDLIM1-205ENST00000493949 TJAP1Q5JTD0 557 aa12.66□□□□□ -0.38
PDLIM1-205ENST00000493949 FASTKD5Q7L8L6 764 aaKnown RBP12.66□□□□□ -0.38
PDLIM1-205ENST00000493949 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
PDLIM1-205ENST00000493949 ZDHHC15Q96MV8 337 aa12.66□□□□□ -0.38
PDLIM1-205ENST00000493949 TMOD2Q9NZR1 351 aa12.66□□□□□ -0.38
PDLIM1-205ENST00000493949 PIEZO1Q92508 2521 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 HMMRO75330 724 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 GCKRQ14397 625 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 CCDC30Q5VVM6 783 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 APOBEC3HQ6NTF7 200 aaKnown RBP12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 ANKRD44Q8N8A2 993 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 SPRYD3Q8NCJ5 442 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 TEKT1Q969V4 418 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 SYAP1Q96A49 352 aaPredicted RBP12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 OSBPL3Q9H4L5 887 aa12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
PDLIM1-205ENST00000493949 DOCK2Q92608 1830 aa12.65□□□□□ -0.39
PDLIM1-205ENST00000493949 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 ANAPC15P60006 121 aa12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 UBE4AQ14139 1066 aa12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 TWISTNBQ3B726 338 aaPredicted RBP12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 MAP3K21Q5TCX8 1036 aa12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 FAM84BQ96KN1 310 aaPredicted RBP12.64□□□□□ -0.39
PDLIM1-205ENST00000493949 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 GAS2L3Q86XJ1 694 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 MYLIPQ8WY64 445 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 INTS4Q96HW7 963 aaKnown RBP12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
PDLIM1-205ENST00000493949 MYH13Q9UKX3 1938 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 LOC285556D6RIA3 1793 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 GYG1P46976 350 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 TRIM32Q13049 653 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 EPHA10Q5JZY3 1008 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 FAM184AQ8NB25 1140 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 TTYH1Q9H313 450 aaPredicted RBP12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 LMBRD1Q9NUN5 540 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 SYNGAP1Q96PV0 1343 aa12.62□□□□□ -0.39
PDLIM1-205ENST00000493949 MCCP23508 829 aa12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 SMAD3P84022 425 aaKnown RBP12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 FOXO4P98177 505 aa12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 ZSCAN23Q3MJ62 389 aa12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 HHIPL2Q6UWX4 724 aa12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 SIRT2Q8IXJ6 389 aa12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 SUGT1Q9Y2Z0 365 aa12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
PDLIM1-205ENST00000493949 RLFQ13129 1914 aa12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 ATRNL1Q5VV63 1379 aa12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 TMEM265A0A087WTH1 108 aa12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 ERC2O15083 957 aa12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 FOSL2P15408 326 aa12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 LRSAM1Q6UWE0 723 aa12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 LDHAL6AQ6ZMR3 332 aa12.6□□□□□ -0.39
PDLIM1-205ENST00000493949 KIAA1211Q6ZU35 1233 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms