RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 TBC1D9BQ66K14 1250 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 ADGRA1Q86SQ6 560 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 ENAHQ8N8S7 591 aaPredicted RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 MLKLQ8NB16 471 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 CELF1Q92879 486 aaKnown RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 FERMT2Q96AC1 680 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 IQSEC3Q9UPP2 1182 aaPredicted RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 RTCBQ9Y3I0 505 aaKnown RBP11.07□□□□□ -0.64
NPHP3-209ENST00000493732 A0A1B0GUL6 1792 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 CACNA1SQ13698 1873 aa11.07□□□□□ -0.64
NPHP3-209ENST00000493732 ECM29Q5VYK3 1845 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 DUOX1Q9NRD9 1551 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 BIN1O00499 593 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 SFPQP23246 707 aaKnown RBP eCLIP11.06□□□□□ -0.64
NPHP3-209ENST00000493732 CTR9Q6PD62 1173 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 AMOTL1Q8IY63 956 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 CCDC112Q8NEF3 446 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 IFNKQ9P0W0 207 aa11.06□□□□□ -0.64
NPHP3-209ENST00000493732 FBXO2Q9UK22 296 aaPredicted RBP11.06□□□□□ -0.64
NPHP3-209ENST00000493732 KIF5BP33176 963 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 TRAPPC10P48553 1259 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 TOB1P50616 345 aaPredicted RBP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 GSTO1P78417 241 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 NCAPHQ15003 741 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 PTPN14Q15678 1187 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 LONRF3Q496Y0 759 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 NT5DC1Q5TFE4 455 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 FAM177A1Q8N128 213 aaPredicted RBP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 STK11IPQ8N1F8 1099 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 WDR66Q8TBY9 1149 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 ERCC4Q92889 916 aaPredicted RBP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 CLIC6Q96NY7 704 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 PHF20Q9BVI0 1012 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 XPO4Q9C0E2 1151 aaKnown RBP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 AATFQ9NY61 560 aaKnown RBP eCLIP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 KCNJ14Q9UNX9 436 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 COL24A1Q17RW2 1714 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 USP17L21D6R901 530 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 HMGB2P26583 209 aaKnown RBP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 FANCCQ00597 558 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 MECOMQ03112 1051 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 TROAPQ12815 778 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 POSTNQ15063 836 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 SMARCE1Q969G3 411 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
NPHP3-209ENST00000493732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
NPHP3-209ENST00000493732 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 GNPATO15228 680 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 CTIFO43310 598 aaKnown RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 SERPINC1P01008 464 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 LDHCP07864 332 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 GNAQP50148 359 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 UBASH3AP57075 661 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 DYNLL1P63167 89 aaKnown RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 CCZ1BP86790 482 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 CCZ1P86791 482 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 RBM10P98175 930 aaKnown RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 MDM2Q00987 491 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 PNOCQ13519 176 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 CEP135Q66GS9 1140 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 TMTC3Q6ZXV5 915 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 METTL16Q86W50 562 aaKnown RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 C16orf45Q96MC5 204 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 DCP1AQ9NPI6 582 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 CCNL1Q9UK58 526 aaPredicted RBP11.04□□□□□ -0.64
NPHP3-209ENST00000493732 PCDHA5Q9Y5H7 936 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 MAST2Q6P0Q8 1798 aa11.04□□□□□ -0.64
NPHP3-209ENST00000493732 NPHP1O15259 732 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 BAG3O95817 575 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 CALML3P27482 149 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 ERCC5P28715 1186 aaPredicted RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 FUT2Q10981 343 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 TMC6Q7Z403 805 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 POLR2DO15514 142 aaKnown RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 LMOD1P29536 600 aaPredicted RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 SARSP49591 514 aaKnown RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 NR5A1Q13285 461 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 PKN1Q16512 942 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 C15orf52Q6ZUT6 534 aaKnown RBP11.03□□□□□ -0.64
NPHP3-209ENST00000493732 NYAP1Q6ZVC0 841 aa11.03□□□□□ -0.64
NPHP3-209ENST00000493732 DGKHQ86XP1 1220 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms