RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 HSPA1LP34931 641 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 ADCY7P51828 1080 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 TRPC3Q13507 836 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 SFMBT2Q5VUG0 894 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 SPATS2Q86XZ4 545 aaKnown RBP22.35■■□□□ 1.17
RNF40-203ENST00000493683 BUB1BO60566 1050 aaPredicted RBP22.35■■□□□ 1.17
RNF40-203ENST00000493683 CPA1P15085 419 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 HIBADHP31937 336 aaKnown RBP22.35■■□□□ 1.17
RNF40-203ENST00000493683 POLD1P28340 1107 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 XAGE2Q96GT9 111 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 CDCA7Q9BWT1 371 aaPredicted RBP22.35■■□□□ 1.17
RNF40-203ENST00000493683 LMBRD1Q9NUN5 540 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 SH3TC1Q8TE82 1336 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 CEP104O60308 925 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 RASSF2P50749 326 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 ASIC3Q9UHC3 531 aa22.35■■□□□ 1.17
RNF40-203ENST00000493683 SBNO1A3KN83 1393 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 ITGA6P23229 1130 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 KLHL30Q0D2K2 578 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 KRT40Q6A162 431 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 SRGAP1Q7Z6B7 1085 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 C19orf44Q9H6X5 657 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 DNM3Q9UQ16 869 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 SHANK2Q9UPX8 1470 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 I3L4J1 428 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 LRRC59Q96AG4 307 aaKnown RBP22.34■■□□□ 1.17
RNF40-203ENST00000493683 VTI1AQ96AJ9 217 aa22.34■■□□□ 1.17
RNF40-203ENST00000493683 AKNAD1Q5T1N1 836 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 MIPOL1Q8TD10 442 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 SNX29Q8TEQ0 813 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 P3H4Q92791 437 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 NT5C3AQ9H0P0 336 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 UBAP1LF5GYI3 381 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 MCTP2Q6DN12 878 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 SDCCAG8Q86SQ7 713 aaPredicted RBP22.33■■□□□ 1.17
RNF40-203ENST00000493683 NELFBQ8WX92 580 aa22.33■■□□□ 1.17
RNF40-203ENST00000493683 TXKP42681 527 aa22.33■■□□□ 1.16
RNF40-203ENST00000493683 DBNDD2Q9BQY9 259 aa22.33■■□□□ 1.16
RNF40-203ENST00000493683 CHL1O00533 1208 aa22.33■■□□□ 1.16
RNF40-203ENST00000493683 KRT24Q2M2I5 525 aa22.33■■□□□ 1.16
RNF40-203ENST00000493683 CCDC169A6NNP5 214 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 BRD1O95696 1058 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 LPIN2Q92539 896 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 ARMT1Q9H993 441 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 HAUS2Q9NVX0 235 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 TRIM58Q8NG06 486 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 TBC1D31Q96DN5 1066 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 PTPRKQ15262 1439 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
RNF40-203ENST00000493683 GCP02774 474 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 CARD14Q9BXL6 1004 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 SH3BGRP55822 239 aaPredicted RBP22.32■■□□□ 1.16
RNF40-203ENST00000493683 ADALQ6DHV7 355 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 PPP1R21Q6ZMI0 780 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 PEX26Q7Z412 305 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 TAB2Q9NYJ8 693 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 TMOD4Q9NZQ9 345 aa22.32■■□□□ 1.16
RNF40-203ENST00000493683 ZNF790Q6PG37 636 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 HERC4Q5GLZ8 1057 aaPredicted RBP22.31■■□□□ 1.16
RNF40-203ENST00000493683 GPCPD1Q9NPB8 672 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 OAS2P29728 719 aaKnown RBP22.31■■□□□ 1.16
RNF40-203ENST00000493683 TAF12Q16514 161 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 GEN1Q17RS7 908 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 NBPF14Q5TI25 921 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 TRIML1Q8N9V2 468 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 KDM3AQ9Y4C1 1321 aa22.31■■□□□ 1.16
RNF40-203ENST00000493683 GIPC1O14908 333 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 IWS1Q96ST2 819 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 CLEC11AQ9Y240 323 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 MROH5Q6ZUA9 1318 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 RNF40O75150 1001 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 SAR1BQ9Y6B6 198 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 CLNS1AP54105 237 aaKnown RBP22.3■■□□□ 1.16
RNF40-203ENST00000493683 TIMM10P62072 90 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 CABP7Q86V35 215 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 NUF2Q9BZD4 464 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 RASA3Q14644 834 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 DENND2CQ68D51 928 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 NCOA5Q9HCD5 579 aaKnown RBP22.3■■□□□ 1.16
RNF40-203ENST00000493683 ZNF131P52739 623 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 YWHAEP62258 255 aaKnown RBP22.3■■□□□ 1.16
RNF40-203ENST00000493683 CALCRLQ16602 461 aa22.3■■□□□ 1.16
RNF40-203ENST00000493683 RBM26Q5T8P6 1007 aaKnown RBP22.3■■□□□ 1.16
RNF40-203ENST00000493683 SND1Q7KZF4 910 aaKnown RBP eCLIP22.3■■□□□ 1.16
RNF40-203ENST00000493683 IFIH1Q9BYX4 1025 aaKnown RBP22.3■■□□□ 1.16
RNF40-203ENST00000493683 ZNF274Q96GC6 653 aaPredicted RBP22.29■■□□□ 1.16
RNF40-203ENST00000493683 TFCP2L1Q9NZI6 479 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 KIAA0232Q92628 1395 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
RNF40-203ENST00000493683 MTX1Q13505 466 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 CCDC38Q502W7 563 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 MAP3K21Q5TCX8 1036 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 TTC16Q8NEE8 873 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 GOLGA8KD6RF30 607 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 SH3BP5O60239 455 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 HOOK2Q96ED9 719 aa22.29■■□□□ 1.16
RNF40-203ENST00000493683 RRAGDQ9NQL2 400 aaPredicted RBP22.29■■□□□ 1.16
RNF40-203ENST00000493683 CNGA1P29973 690 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms