RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 NBPF3Q9H094 633 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 ZMYND8Q9ULU4 1186 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-205ENST00000493621 FLT1P17948 1338 aa15.14■□□□□ 0.01
SAMM50-205ENST00000493621 BCAR3O75815 825 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
SAMM50-205ENST00000493621 PPP4CP60510 307 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 HERVK_113P62684 666 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 CCDC158Q5M9N0 1113 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 ADGRA1Q86SQ6 560 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 DBNDD2Q9BQY9 259 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 DNAJC18Q9H819 358 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 PALD1Q9ULE6 856 aa15.13■□□□□ 0.01
SAMM50-205ENST00000493621 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 CYP2E1P05181 493 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-205ENST00000493621 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-205ENST00000493621 OS9Q13438 667 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-205ENST00000493621 TNNI3KQ59H18 835 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
SAMM50-205ENST00000493621 FOXP4Q8IVH2 680 aaPredicted RBP15.12■□□□□ 0.01
SAMM50-205ENST00000493621 GPRC5AQ8NFJ5 357 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 NUDT12Q9BQG2 462 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 C11orf49Q9H6J7 331 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 TXNRD2Q9NNW7 524 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 GPR108Q9NPR9 543 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 SAP30BPQ9UHR5 308 aaKnown RBP15.12■□□□□ 0.01
SAMM50-205ENST00000493621 FPGT-TNNI3KV9GXZ4 949 aa15.12■□□□□ 0.01
SAMM50-205ENST00000493621 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
SAMM50-205ENST00000493621 MAP3K21Q5TCX8 1036 aa15.11■□□□□ 0.01
SAMM50-205ENST00000493621 SLC17A8Q8NDX2 589 aa15.11■□□□□ 0.01
SAMM50-205ENST00000493621 SOCS4Q8WXH5 440 aa15.11■□□□□ 0.01
SAMM50-205ENST00000493621 GDF15Q99988 308 aa15.11■□□□□ 0.01
SAMM50-205ENST00000493621 RBPJLQ9UBG7 517 aa15.11■□□□□ 0.01
SAMM50-205ENST00000493621 OGDHLQ9ULD0 1010 aa15.11■□□□□ 0.01
SAMM50-205ENST00000493621 ZBTB21Q9ULJ3 1066 aa15.11■□□□□ 0.01
SAMM50-205ENST00000493621 HLA-DOAP06340 250 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 SYN1P17600 705 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 BMP8BP34820 402 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 ZAP70P43403 619 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 DYNLL1P63167 89 aaKnown RBP15.1■□□□□ 0.01
SAMM50-205ENST00000493621 POLA2Q14181 598 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 Q3C1V9 767 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 CCAR1Q8IX12 1150 aaKnown RBP15.1■□□□□ 0.01
SAMM50-205ENST00000493621 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 PAGR1Q9BTK6 254 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 PIH1D3Q9NQM4 214 aaKnown RBP15.1■□□□□ 0.01
SAMM50-205ENST00000493621 GINM1Q9NU53 330 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 FRMPD3Q5JV73 1810 aa15.1■□□□□ 0.01
SAMM50-205ENST00000493621 SURF6O75683 361 aaKnown RBP15.09■□□□□ 0.01
SAMM50-205ENST00000493621 XRCC5P13010 732 aaKnown RBP15.09■□□□□ 0.01
SAMM50-205ENST00000493621 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
SAMM50-205ENST00000493621 CYP7A1P22680 504 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 MAPK4P31152 587 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 ERVK-9P63128 1117 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 ERVK-24P63145 666 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 TRMT44Q8IYL2 757 aaKnown RBP15.09■□□□□ 0.01
SAMM50-205ENST00000493621 SSH3Q8TE77 659 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 PORCNQ9H237 461 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 EMILIN3Q9NT22 766 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 LAMA3Q16787 3333 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 COL6A3P12111 3177 aa15.09■□□□□ 0.01
SAMM50-205ENST00000493621 RGS2P41220 211 aa15.08■□□□□ 0
SAMM50-205ENST00000493621 MAGEA10P43363 369 aaPredicted RBP15.08■□□□□ 0
SAMM50-205ENST00000493621 ATP8B2P98198 1209 aa15.08■□□□□ 0
SAMM50-205ENST00000493621 CACNB2Q08289 660 aaPredicted RBP15.08■□□□□ 0
SAMM50-205ENST00000493621 CCL14Q16627 93 aa15.08■□□□□ 0
SAMM50-205ENST00000493621 GPR142Q7Z601 462 aa15.08■□□□□ 0
SAMM50-205ENST00000493621 GTF3C2Q8WUA4 911 aaPredicted RBP15.08■□□□□ 0
SAMM50-205ENST00000493621 USP6NLQ92738 828 aa15.08■□□□□ 0
SAMM50-205ENST00000493621 ZNF512BQ96KM6 892 aaPredicted RBP15.08■□□□□ 0
SAMM50-205ENST00000493621 C1orf115Q9H7X2 142 aa15.08■□□□□ 0
SAMM50-205ENST00000493621 TLR7Q9NYK1 1049 aaKnown RBP15.08■□□□□ 0
SAMM50-205ENST00000493621 PFASO15067 1338 aa15.08■□□□□ 0
SAMM50-205ENST00000493621 GH2P01242 217 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 CCND3P30281 292 aaPredicted RBP15.07■□□□□ 0
SAMM50-205ENST00000493621 USP5P45974 858 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
SAMM50-205ENST00000493621 MORN1Q5T089 497 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 ZKSCAN2Q63HK3 967 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 POTEEQ6S8J3 1075 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 PLEKHH3Q7Z736 793 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 MIGA1Q8NAN2 632 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 FEZ1Q99689 392 aa15.07■□□□□ 0
SAMM50-205ENST00000493621 CCDC8Q9H0W5 538 aaPredicted RBP15.07■□□□□ 0
SAMM50-205ENST00000493621 CWC22Q9HCG8 908 aaKnown RBP15.07■□□□□ 0
SAMM50-205ENST00000493621 DBNLQ9UJU6 430 aaKnown RBP15.07■□□□□ 0
SAMM50-205ENST00000493621 CCER2I3L3R5 266 aa15.06■□□□□ 0
SAMM50-205ENST00000493621 DLL1O00548 723 aa15.06■□□□□ 0
SAMM50-205ENST00000493621 IGSF3O75054 1194 aa15.06■□□□□ 0
SAMM50-205ENST00000493621 IDH1O75874 414 aaKnown RBP15.06■□□□□ 0
SAMM50-205ENST00000493621 APBA2Q99767 749 aa15.06■□□□□ 0
SAMM50-205ENST00000493621 USP17L15C9J2P7 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 USP17L13C9JLJ4 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 USP17L11C9JVI0 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 USP17L18D6R9N7 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 USP17L22D6RA61 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 USP17L17D6RBQ6 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 USP17L19D6RCP7 530 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms