RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 BACE1P56817 501 aa12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 JAG1P78504 1218 aa12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 DEFB118Q96PH6 123 aa12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 WDR18Q9BV38 432 aa12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 TMOD4Q9NZQ9 345 aa12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 SAP30BPQ9UHR5 308 aaKnown RBP12.55□□□□□ -0.4
NUDCD3-210ENST00000493613 DNAH12Q6ZR08 3092 aa12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 IDH1O75874 414 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 GDF11O95390 407 aa12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 TFRCP02786 760 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 HLA-DOAP06340 250 aa12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 CYP7A1P22680 504 aa12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 IRX3P78415 501 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 METTL16Q86W50 562 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-210ENST00000493613 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 C19orf81C9J6K1 198 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 HMGCRP04035 888 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 CAPN2P17655 700 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 GINM1Q9NU53 330 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 MORF4L1Q9UBU8 362 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 NR2E3Q9Y5X4 410 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 NDUFB9Q9Y6M9 179 aa12.53□□□□□ -0.4
NUDCD3-210ENST00000493613 HOXA7P31268 230 aaPredicted RBP12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 USP5P45974 858 aa12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 HERVK_113P62684 666 aa12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 CEP85Q6P2H3 762 aa12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 MAGEB6Q8N7X4 407 aa12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 GJD2Q9UKL4 321 aa12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
NUDCD3-210ENST00000493613 COL11A1P12107 1806 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 EVI5O60447 810 aa12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 MAP3K12Q12852 859 aa12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 AACSQ86V21 672 aa12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 PAWRQ96IZ0 340 aaKnown RBP12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 ANTXR1Q9H6X2 564 aa12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 A0A0G2JMZ2 1700 aa12.51□□□□□ -0.41
NUDCD3-210ENST00000493613 RLFQ13129 1914 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 PEX10O60683 326 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 GH2P01242 217 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 TRIM32Q13049 653 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 TMED8Q6PL24 325 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 GPRC5AQ8NFJ5 357 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 TRIB2Q92519 343 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 TXNRD2Q9NNW7 524 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 HMX1Q9NP08 348 aaPredicted RBP12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 RPTORQ8N122 1335 aa12.5□□□□□ -0.41
NUDCD3-210ENST00000493613 LAMA3Q16787 3333 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 ZBED9Q6R2W3 1325 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 CYP2B6P20813 491 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 ERVK-9P63128 1117 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 ERVK-24P63145 666 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 ZYXQ15942 572 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L2Q6R6M4 530 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 NECAB2Q7Z6G3 386 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 CCAR1Q8IX12 1150 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 DIS3LQ8TF46 1054 aaKnown RBP12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 FEZ1Q99689 392 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 PAGR1Q9BTK6 254 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 EHD4Q9H223 541 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 IL1RAPL2Q9NP60 686 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 RBPJLQ9UBG7 517 aa12.49□□□□□ -0.41
NUDCD3-210ENST00000493613 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 ZNF236Q9UL36 1845 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 MAPK4P31152 587 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 RAB3GAP1Q15042 981 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 TTF1Q15361 905 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 CERKLQ49MI3 558 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 HSP90AB4PQ58FF6 505 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 GTF3C2Q8WUA4 911 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 PRO3102Q9H379 93 aa12.48□□□□□ -0.41
NUDCD3-210ENST00000493613 MAGEB6P1A0A0J9YX57 407 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms