RNA–Protein interactions for RNA: ENST00000493403.1

ARPC1B-221, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-221ENST00000493403 GLRX3O76003 335 aaKnown RBP20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 SLURP2P0DP57 97 aa20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 TRIM32Q13049 653 aa20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 METTL16Q86W50 562 aaKnown RBP20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 ZNF384Q8TF68 577 aa20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 NEUROD6Q96NK8 337 aa20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 APBA2Q99767 749 aa20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 LRP2BPQ9P2M1 347 aa20.35■□□□□ 0.85
ARPC1B-221ENST00000493403 TFCP2Q12800 502 aa20.34■□□□□ 0.85
ARPC1B-221ENST00000493403 P2RX7Q99572 595 aaKnown RBP20.34■□□□□ 0.85
ARPC1B-221ENST00000493403 ERVK-9P63128 1117 aa20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 ERVK-24P63145 666 aa20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 CCNA1P78396 465 aa20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 CACNB2Q08289 660 aaPredicted RBP20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 CERS3Q8IU89 383 aa20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 CRACR2BQ8N4Y2 399 aaPredicted RBP20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 ARHGAP45Q92619 1136 aa20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 USP6NLQ92738 828 aa20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 NOB1Q9ULX3 412 aaKnown RBP20.33■□□□□ 0.85
ARPC1B-221ENST00000493403 PPP4CP60510 307 aa20.32■□□□□ 0.84
ARPC1B-221ENST00000493403 Q7L0L9 218 aa20.32■□□□□ 0.84
ARPC1B-221ENST00000493403 GPR142Q7Z601 462 aa20.32■□□□□ 0.84
ARPC1B-221ENST00000493403 PLEKHH3Q7Z736 793 aa20.32■□□□□ 0.84
ARPC1B-221ENST00000493403 LBHD1Q9BQE6 289 aaPredicted RBP20.32■□□□□ 0.84
ARPC1B-221ENST00000493403 CWC22Q9HCG8 908 aaKnown RBP20.32■□□□□ 0.84
ARPC1B-221ENST00000493403 HLA-DOAP06340 250 aa20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 MORN1Q5T089 497 aa20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 LHX8Q68G74 356 aa20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 NAA16Q6N069 864 aaPredicted RBP20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 USP17L2Q6R6M4 530 aa20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 MEIS3Q99687 375 aa20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 RBPJLQ9UBG7 517 aa20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 RABGAP1Q9Y3P9 1069 aa20.31■□□□□ 0.84
ARPC1B-221ENST00000493403 CUL9Q8IWT3 2517 aa20.3■□□□□ 0.84
ARPC1B-221ENST00000493403 RRP1BQ14684 758 aaKnown RBP20.3■□□□□ 0.84
ARPC1B-221ENST00000493403 MFSD14CQ5VZR4 134 aa20.3■□□□□ 0.84
ARPC1B-221ENST00000493403 SH3RF3Q8TEJ3 882 aaPredicted RBP20.3■□□□□ 0.84
ARPC1B-221ENST00000493403 TXNRD2Q9NNW7 524 aa20.3■□□□□ 0.84
ARPC1B-221ENST00000493403 POTEB2H3BUK9 544 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 USP14P54578 494 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 MAP2K5Q13163 448 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 TMED8Q6PL24 325 aaPredicted RBP20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 TBC1D9Q6ZT07 1266 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 C12orf42Q96LP6 360 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 PRKAG2Q9UGJ0 569 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 ZBTB21Q9ULJ3 1066 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 MAST2Q6P0Q8 1798 aa20.29■□□□□ 0.84
ARPC1B-221ENST00000493403 FLT1P17948 1338 aa20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 MCAMP43121 646 aa20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 G3BP1Q13283 466 aaKnown RBP eCLIP20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 LRRC26Q2I0M4 334 aa20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 TRMT2AQ8IZ69 625 aaKnown RBP20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 EDC3Q96F86 508 aaKnown RBP20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 AATFQ9NY61 560 aaKnown RBP eCLIP20.28■□□□□ 0.84
ARPC1B-221ENST00000493403 CCDC158Q5M9N0 1113 aa20.27■□□□□ 0.84
ARPC1B-221ENST00000493403 PI16Q6UXB8 463 aa20.27■□□□□ 0.84
ARPC1B-221ENST00000493403 TGFBRAP1Q8WUH2 860 aa20.27■□□□□ 0.84
ARPC1B-221ENST00000493403 LPAR1Q92633 364 aa20.27■□□□□ 0.84
ARPC1B-221ENST00000493403 GPR108Q9NPR9 543 aa20.27■□□□□ 0.84
ARPC1B-221ENST00000493403 IVNS1ABPQ9Y6Y0 642 aa20.27■□□□□ 0.84
ARPC1B-221ENST00000493403 FOCADQ5VW36 1801 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 SLC15A5A6NIM6 579 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L15C9J2P7 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L13C9JLJ4 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L11C9JVI0 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L18D6R9N7 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L22D6RA61 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L17D6RBQ6 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L19D6RCP7 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L20D6RJB6 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 DNM1LO00429 736 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 HOXC6P09630 235 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 CCND3P30281 292 aaPredicted RBP20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 MDM2Q00987 491 aaPredicted RBP20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 USP17L24Q0WX57 530 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 Q3C1V9 767 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 LBX2Q6XYB7 198 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 ZNF512BQ96KM6 892 aaPredicted RBP20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 PORCNQ9H237 461 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 DNAJC18Q9H819 358 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 DDX20Q9UHI6 824 aaKnown RBP20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 UNC80Q8N2C7 3258 aa20.26■□□□□ 0.83
ARPC1B-221ENST00000493403 SIPA1L1O43166 1804 aa20.25■□□□□ 0.83
ARPC1B-221ENST00000493403 GNAI2P04899 355 aa20.25■□□□□ 0.83
ARPC1B-221ENST00000493403 ZNF697Q5TEC3 545 aa20.25■□□□□ 0.83
ARPC1B-221ENST00000493403 EMILIN3Q9NT22 766 aa20.25■□□□□ 0.83
ARPC1B-221ENST00000493403 ZNF316A6NFI3 1004 aaPredicted RBP20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 IPO8O15397 1037 aaKnown RBP20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 CCL14Q16627 93 aa20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 TTC39AQ5SRH9 613 aa20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 MAPKAPK5Q8IW41 473 aa20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 FEZ1Q99689 392 aa20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 COL25A1Q9BXS0 654 aaPredicted RBP20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 SENP6Q9GZR1 1112 aaPredicted RBP20.24■□□□□ 0.83
ARPC1B-221ENST00000493403 FRMPD3Q5JV73 1810 aa20.23■□□□□ 0.83
ARPC1B-221ENST00000493403 GDF11O95390 407 aa20.23■□□□□ 0.83
ARPC1B-221ENST00000493403 PTPREP23469 700 aa20.23■□□□□ 0.83
ARPC1B-221ENST00000493403 ATP2B2Q01814 1243 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms