RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 BAG3O95817 575 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 SYN1P17600 705 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 CYP2B6P20813 491 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 MCAMP43121 646 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
SND1-215ENST00000492772 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 PFASO15067 1338 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 CUL9Q8IWT3 2517 aa13.54□□□□□ -0.24
SND1-215ENST00000492772 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
SND1-215ENST00000492772 CCAR1Q8IX12 1150 aaKnown RBP13.53□□□□□ -0.24
SND1-215ENST00000492772 CRACR2BQ8N4Y2 399 aaPredicted RBP13.53□□□□□ -0.24
SND1-215ENST00000492772 P2RX7Q99572 595 aaKnown RBP13.53□□□□□ -0.24
SND1-215ENST00000492772 UBE2OQ9C0C9 1292 aaKnown RBP13.53□□□□□ -0.24
SND1-215ENST00000492772 STXBP5LQ9Y2K9 1186 aa13.53□□□□□ -0.24
SND1-215ENST00000492772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.53□□□□□ -0.24
SND1-215ENST00000492772 FLT1P17948 1338 aa13.53□□□□□ -0.24
SND1-215ENST00000492772 A0A0C4DFX4 3053 aa13.53□□□□□ -0.24
SND1-215ENST00000492772 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 IGSF3O75054 1194 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 COL6A1P12109 1028 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 RGS2P41220 211 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 ERVK-9P63128 1117 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 ERVK-24P63145 666 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 G3BP1Q13283 466 aaKnown RBP eCLIP13.52□□□□□ -0.252e-8■■□□□ 11.5
SND1-215ENST00000492772 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.25
SND1-215ENST00000492772 APBA2Q99767 749 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 DNAJC18Q9H819 358 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 TXNRD2Q9NNW7 524 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 AATFQ9NY61 560 aaKnown RBP eCLIP13.52□□□□□ -0.25
SND1-215ENST00000492772 ZBTB21Q9ULJ3 1066 aa13.52□□□□□ -0.25
SND1-215ENST00000492772 GNAI2P04899 355 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 RARSP54136 660 aaKnown RBP13.51□□□□□ -0.25
SND1-215ENST00000492772 PPP4CP60510 307 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 CACNB2Q08289 660 aaPredicted RBP13.51□□□□□ -0.25
SND1-215ENST00000492772 ATF7IPQ6VMQ6 1270 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 Q7L0L9 218 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 GPR142Q7Z601 462 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 FOXP4Q8IVH2 680 aaPredicted RBP13.51□□□□□ -0.25
SND1-215ENST00000492772 MAPKAPK5Q8IW41 473 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 TGFBRAP1Q8WUH2 860 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 USP6NLQ92738 828 aa13.51□□□□□ -0.25
SND1-215ENST00000492772 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
SND1-215ENST00000492772 GDF11O95390 407 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 TTC39AQ5SRH9 613 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 MORN1Q5T089 497 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 USP17L2Q6R6M4 530 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 PLEKHH3Q7Z736 793 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 PAGR1Q9BTK6 254 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 GPR108Q9NPR9 543 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 RBPJLQ9UBG7 517 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 MYH1P12882 1939 aa13.5□□□□□ -0.25
SND1-215ENST00000492772 MYO5AQ9Y4I1 1855 aaKnown RBP13.5□□□□□ -0.25
SND1-215ENST00000492772 PEX10O60683 326 aa13.49□□□□□ -0.25
SND1-215ENST00000492772 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
SND1-215ENST00000492772 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
SND1-215ENST00000492772 CCNA1P78396 465 aa13.49□□□□□ -0.25
SND1-215ENST00000492772 JAG1P78504 1218 aa13.49□□□□□ -0.25
SND1-215ENST00000492772 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
SND1-215ENST00000492772 LHX8Q68G74 356 aa13.49□□□□□ -0.25
SND1-215ENST00000492772 PORCNQ9H237 461 aa13.49□□□□□ -0.25
SND1-215ENST00000492772 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
SND1-215ENST00000492772 PNMA6EA0A0J9YXQ4 647 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 IPO8O15397 1037 aaKnown RBP13.48□□□□□ -0.25
SND1-215ENST00000492772 MAP2K5Q13163 448 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 CCL14Q16627 93 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 SHROOM1Q2M3G4 852 aaPredicted RBP13.48□□□□□ -0.25
SND1-215ENST00000492772 ADGRA1Q86SQ6 560 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 CERS3Q8IU89 383 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 C12orf42Q96LP6 360 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 SNRKQ9NRH2 765 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 RABGAP1Q9Y3P9 1069 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
SND1-215ENST00000492772 MSCO60682 206 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 USP14P54578 494 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 Q3C1V9 767 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 MFSD14CQ5VZR4 134 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 ZNF512BQ96KM6 892 aaPredicted RBP13.47□□□□□ -0.25
SND1-215ENST00000492772 FEZ1Q99689 392 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
SND1-215ENST00000492772 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 LTBP2Q14767 1821 aa13.47□□□□□ -0.25
SND1-215ENST00000492772 USP17L15C9J2P7 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 USP17L13C9JLJ4 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 USP17L11C9JVI0 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 USP17L18D6R9N7 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 USP17L22D6RA61 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 USP17L17D6RBQ6 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 USP17L19D6RCP7 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 USP17L20D6RJB6 530 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 GH2P01242 217 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 CYP2E1P05181 493 aaPredicted RBP13.46□□□□□ -0.25
SND1-215ENST00000492772 TRIM27P14373 513 aa13.46□□□□□ -0.25
SND1-215ENST00000492772 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms