RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 RNPC3Q96LT9 517 aaKnown RBP16.56■□□□□ 0.24
GAPDH-209ENST00000492719 PNMA6EA0A0J9YXQ4 647 aa16.55■□□□□ 0.24
GAPDH-209ENST00000492719 DNAJB2P25686 324 aa16.55■□□□□ 0.24
GAPDH-209ENST00000492719 CACNB2Q08289 660 aaPredicted RBP16.55■□□□□ 0.24
GAPDH-209ENST00000492719 TCP10Q12799 353 aa16.55■□□□□ 0.24
GAPDH-209ENST00000492719 GAS2L1Q99501 681 aaPredicted RBP16.55■□□□□ 0.24
GAPDH-209ENST00000492719 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
GAPDH-209ENST00000492719 PLXNA1Q9UIW2 1896 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 TRIM75PA6NK02 468 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 ENTPD3O75355 529 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 POLA2Q14181 598 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
GAPDH-209ENST00000492719 TMEM31Q5JXX7 168 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 TREML2Q5T2D2 321 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
GAPDH-209ENST00000492719 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
GAPDH-209ENST00000492719 RFX7Q2KHR2 1363 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 ATRNL1Q5VV63 1379 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
GAPDH-209ENST00000492719 SPTY2D1Q68D10 685 aaPredicted RBP16.53■□□□□ 0.24
GAPDH-209ENST00000492719 ZFPM1Q8IX07 1006 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 TMEM57Q8N5G2 664 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 CLUAP1Q96AJ1 413 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 ZNF576Q9H609 170 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.53■□□□□ 0.24
GAPDH-209ENST00000492719 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 AFG3L2Q9Y4W6 797 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 LOC285556D6RIA3 1793 aa16.53■□□□□ 0.24
GAPDH-209ENST00000492719 GPR75-ASB3A0A0A6YYF3 556 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 FAM86C2PA6NEL3 165 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 PHF20L1A8MW92 1017 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
GAPDH-209ENST00000492719 PTPRAP18433 802 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 ARID4AP29374 1257 aaPredicted RBP16.52■□□□□ 0.24
GAPDH-209ENST00000492719 MRE11P49959 708 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 ATP8B2P98198 1209 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 CCDC84Q86UT8 332 aaPredicted RBP16.52■□□□□ 0.24
GAPDH-209ENST00000492719 SLF2Q8IX21 1173 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 GPR108Q9NPR9 543 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 HMG20BQ9P0W2 317 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
GAPDH-209ENST00000492719 SH3BP5LQ7L8J4 393 aa16.51■□□□□ 0.23
GAPDH-209ENST00000492719 PRDM12Q9H4Q4 367 aa16.51■□□□□ 0.23
GAPDH-209ENST00000492719 REV3LO60673 3130 aa16.51■□□□□ 0.23
GAPDH-209ENST00000492719 MAP4K4O95819 1239 aaPredicted RBP16.5■□□□□ 0.23
GAPDH-209ENST00000492719 RGS3P49796 1198 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 RHBDL3P58872 404 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 HNRNPUQ00839 825 aaKnown RBP eCLIP16.5■□□□□ 0.23
GAPDH-209ENST00000492719 MECOMQ03112 1051 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 G3BP1Q13283 466 aaKnown RBP eCLIP16.5■□□□□ 0.234e-75■□□□□ 10.2
GAPDH-209ENST00000492719 CCL14Q16627 93 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 DIEXFQ68CQ4 756 aaKnown RBP16.5■□□□□ 0.23
GAPDH-209ENST00000492719 SPATA5Q8NB90 893 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 TIFAQ96CG3 184 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 ABCF2Q9UG63 623 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 NOP58Q9Y2X3 529 aaKnown RBP16.5■□□□□ 0.23
GAPDH-209ENST00000492719 MYH13Q9UKX3 1938 aa16.5■□□□□ 0.23
GAPDH-209ENST00000492719 CHD9Q3L8U1 2897 aa16.49■□□□□ 0.23
GAPDH-209ENST00000492719 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
GAPDH-209ENST00000492719 ERICH6Q7L0X2 663 aa16.49■□□□□ 0.23
GAPDH-209ENST00000492719 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
GAPDH-209ENST00000492719 DZIP1Q86YF9 867 aaKnown RBP16.49■□□□□ 0.23
GAPDH-209ENST00000492719 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
GAPDH-209ENST00000492719 NEUROD6Q96NK8 337 aa16.49■□□□□ 0.23
GAPDH-209ENST00000492719 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
GAPDH-209ENST00000492719 NUDT12Q9BQG2 462 aa16.49■□□□□ 0.23
GAPDH-209ENST00000492719 MROH7-TTC4A0A0A0MT08 1334 aa16.48■□□□□ 0.23
GAPDH-209ENST00000492719 TBC1D12O60347 775 aa16.48■□□□□ 0.23
GAPDH-209ENST00000492719 PEX10O60683 326 aa16.48■□□□□ 0.23
GAPDH-209ENST00000492719 IGSF3O75054 1194 aa16.48■□□□□ 0.23
GAPDH-209ENST00000492719 RLBP1P12271 317 aa16.48■□□□□ 0.23
GAPDH-209ENST00000492719 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
GAPDH-209ENST00000492719 EPHB4P54760 987 aa16.48■□□□□ 0.23
GAPDH-209ENST00000492719 ZNF512BQ96KM6 892 aaPredicted RBP16.48■□□□□ 0.23
GAPDH-209ENST00000492719 DDX4Q9NQI0 724 aaKnown RBP16.48■□□□□ 0.23
GAPDH-209ENST00000492719 PDLIM7Q9NR12 457 aa16.48■□□□□ 0.23
GAPDH-209ENST00000492719 DDTLA6NHG4 134 aaPredicted RBP16.47■□□□□ 0.23
GAPDH-209ENST00000492719 UQCRFS1P1P0C7P4 283 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 BMP1P13497 986 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 IGFBP4P22692 258 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 MCAMP43121 646 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 BTDP43251 543 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 TFF2Q03403 129 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 TRIM60Q495X7 471 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 PI16Q6UXB8 463 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 SOCS4Q8WXH5 440 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 C11orf16Q9NQ32 467 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
GAPDH-209ENST00000492719 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
GAPDH-209ENST00000492719 TRIM43BA6NCK2 446 aa16.46■□□□□ 0.23
GAPDH-209ENST00000492719 LDHCP07864 332 aa16.46■□□□□ 0.23
GAPDH-209ENST00000492719 SLURP2P0DP57 97 aa16.46■□□□□ 0.23
GAPDH-209ENST00000492719 KCNQ1P51787 676 aa16.46■□□□□ 0.23
GAPDH-209ENST00000492719 GSTO1P78417 241 aa16.46■□□□□ 0.23
GAPDH-209ENST00000492719 ADGRE1Q14246 886 aa16.46■□□□□ 0.23
GAPDH-209ENST00000492719 TNNI3KQ59H18 835 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms