RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 EGFLAMQ63HQ2 1017 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 SPNS2Q8IVW8 549 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 SULF2Q8IWU5 870 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 TRIM42Q8IWZ5 723 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 KCNB2Q92953 911 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 SNTG2Q9NY99 539 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 NOP58Q9Y2X3 529 aaKnown RBP4.16□□□□□ -1.74
SNX13-209ENST00000492626 EID1Q9Y6B2 187 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 PIK3C2BO00750 1634 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 AGRPO00253 132 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 KIF4AO95239 1232 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 GLIS3Q8NEA6 775 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 CEP89Q96ST8 783 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 BHLHE41Q9C0J9 482 aaPredicted RBP4.16□□□□□ -1.74
SNX13-209ENST00000492626 ST7Q9NRC1 585 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 PPT2Q9UMR5 302 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 LRPPRCP42704 1394 aaKnown RBP4.16□□□□□ -1.74
SNX13-209ENST00000492626 CDC14CA4D256 554 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 NME2P22392 152 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 TNP2Q05952 138 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 CT47A1Q5JQC4 288 aaPredicted RBP4.15□□□□□ -1.74
SNX13-209ENST00000492626 RAB44Q7Z6P3 723 aaPredicted RBP4.15□□□□□ -1.74
SNX13-209ENST00000492626 RHOVQ96L33 236 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 SLC12A7Q9Y666 1083 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 ADGRL2O95490 1459 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 METTL12A8MUP2 240 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 CD33P20138 364 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 GRIA4P48058 902 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 ZNF662Q6ZS27 426 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 HFE2Q6ZVN8 426 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 SLITRK4Q8IW52 837 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 CEP120Q8N960 986 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 GATAD2BQ8WXI9 593 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 NXPE3Q969Y0 559 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 KLRG1Q96E93 195 aa4.15□□□□□ -1.74
SNX13-209ENST00000492626 HFM1A2PYH4 1435 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 J3QW42 95 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 PDPK1O15530 556 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 BMP4P12644 408 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 IKBKEQ14164 716 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 TCEAL1Q15170 157 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 ARSHQ5FYA8 562 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 ZNF576Q9H609 170 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 FANCLQ9NW38 375 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 CDC42BPGQ6DT37 1551 aa4.15□□□□□ -1.75
SNX13-209ENST00000492626 VIRMAQ69YN4 1812 aaKnown RBP4.15□□□□□ -1.75
SNX13-209ENST00000492626 TRPA1O75762 1119 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 F13A1P00488 732 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 NAT2P11245 290 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 PDE4BQ07343 736 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 AP3B2Q13367 1082 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 FAM35AQ86V20 835 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 CACTIN-AS1Q8N1I8 211 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 GTPBP3Q969Y2 492 aaKnown RBP4.14□□□□□ -1.75
SNX13-209ENST00000492626 ABHD17AQ96GS6 310 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 RASSF4Q9H2L5 321 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 SENP2Q9HC62 589 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 TMEM2Q9UHN6 1383 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 MST1RQ04912 1400 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 GREM1O60565 184 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 TFE3P19532 575 aaPredicted RBP4.14□□□□□ -1.75
SNX13-209ENST00000492626 CNGA1P29973 690 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 CDC27P30260 824 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 TRIM22Q8IYM9 498 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 PLD4Q96BZ4 506 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 LACRTQ9GZZ8 138 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 CCDC113Q9H0I3 377 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 DNAJB12Q9NXW2 375 aaKnown RBP4.14□□□□□ -1.75
SNX13-209ENST00000492626 MAPK8IP1Q9UQF2 711 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 COL4A3BPQ9Y5P4 624 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 EFSO43281 561 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 CPB1P15086 417 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 FGFR3P22607 806 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 ARNTP27540 789 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 GRIN2CQ14957 1233 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 REC114Q7Z4M0 266 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 REXO1Q8N1G1 1221 aaKnown RBP4.14□□□□□ -1.75
SNX13-209ENST00000492626 TRPM4Q8TD43 1214 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 ELMO3Q96BJ8 720 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 CORO1BQ9BR76 489 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 BRINP2Q9C0B6 783 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 DNMT3LQ9UJW3 386 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 PLEKHG2Q9H7P9 1386 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 KIF15Q9NS87 1388 aa4.14□□□□□ -1.75
SNX13-209ENST00000492626 NRXN3Q9Y4C0 1643 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 ZFATQ9P243 1243 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 WNK3Q9BYP7 1800 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 PIK3C2AO00443 1686 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 TOPAZ1Q8N9V7 1692 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 USP19O94966 1318 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 IQCA1LA6NCM1 817 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 DGAT1O75907 488 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 ACPPP15309 386 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 ALAS2P22557 587 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 SERINC3Q13530 473 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 SEPT6Q14141 434 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 PDE3AQ14432 1141 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 VPS72Q15906 364 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 KIFC2Q96AC6 838 aa4.13□□□□□ -1.75
SNX13-209ENST00000492626 BRMS1Q9HCU9 246 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms