RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
GPNMB-213ENST00000492512 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
GPNMB-213ENST00000492512 C19orf81C9J6K1 198 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 SRGAP3O43295 1099 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 CCND3P30281 292 aaPredicted RBP16.9■□□□□ 0.3
GPNMB-213ENST00000492512 RGS2P41220 211 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 ERVK-9P63128 1117 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 ERVK-24P63145 666 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 SH3RF3Q8TEJ3 882 aaPredicted RBP16.9■□□□□ 0.3
GPNMB-213ENST00000492512 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
GPNMB-213ENST00000492512 CWC22Q9HCG8 908 aaKnown RBP16.9■□□□□ 0.3
GPNMB-213ENST00000492512 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
GPNMB-213ENST00000492512 FRMPD3Q5JV73 1810 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 CDK5RAP2Q96SN8 1893 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 USP17L10C9JJH3 530 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 CCL14Q16627 93 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 LHX8Q68G74 356 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 GPR142Q7Z601 462 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 PLEKHH3Q7Z736 793 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 CRACR2BQ8N4Y2 399 aaPredicted RBP16.89■□□□□ 0.29
GPNMB-213ENST00000492512 USP6NLQ92738 828 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 COL25A1Q9BXS0 654 aaPredicted RBP16.89■□□□□ 0.29
GPNMB-213ENST00000492512 PORCNQ9H237 461 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 RBPJLQ9UBG7 517 aa16.89■□□□□ 0.29
GPNMB-213ENST00000492512 BAG3O95817 575 aa16.88■□□□□ 0.29
GPNMB-213ENST00000492512 ARID4AP29374 1257 aaPredicted RBP16.88■□□□□ 0.29
GPNMB-213ENST00000492512 JAG1P78504 1218 aa16.88■□□□□ 0.29
GPNMB-213ENST00000492512 Q3C1V9 767 aa16.88■□□□□ 0.29
GPNMB-213ENST00000492512 MORN1Q5T089 497 aa16.88■□□□□ 0.29
GPNMB-213ENST00000492512 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.88■□□□□ 0.29
GPNMB-213ENST00000492512 GTF3C2Q8WUA4 911 aaPredicted RBP16.88■□□□□ 0.29
GPNMB-213ENST00000492512 APBA2Q99767 749 aa16.88■□□□□ 0.29
GPNMB-213ENST00000492512 LBHD1Q9BQE6 289 aaPredicted RBP16.88■□□□□ 0.29
GPNMB-213ENST00000492512 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
GPNMB-213ENST00000492512 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.88■□□□□ 0.29
GPNMB-213ENST00000492512 GDF11O95390 407 aa16.87■□□□□ 0.29
GPNMB-213ENST00000492512 GNAI3P08754 354 aa16.87■□□□□ 0.29
GPNMB-213ENST00000492512 PLCG2P16885 1265 aa16.87■□□□□ 0.29
GPNMB-213ENST00000492512 MCAMP43121 646 aa16.87■□□□□ 0.29
GPNMB-213ENST00000492512 FAM109BQ6ICB4 259 aaPredicted RBP16.87■□□□□ 0.29
GPNMB-213ENST00000492512 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
GPNMB-213ENST00000492512 FOXP4Q8IVH2 680 aaPredicted RBP16.87■□□□□ 0.29
GPNMB-213ENST00000492512 TGFBRAP1Q8WUH2 860 aa16.87■□□□□ 0.29
GPNMB-213ENST00000492512 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
GPNMB-213ENST00000492512 GINM1Q9NU53 330 aa16.87■□□□□ 0.29
GPNMB-213ENST00000492512 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
GPNMB-213ENST00000492512 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
GPNMB-213ENST00000492512 UQCRFS1P1P0C7P4 283 aa16.86■□□□□ 0.29
GPNMB-213ENST00000492512 MTX1Q13505 466 aa16.86■□□□□ 0.29
GPNMB-213ENST00000492512 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
GPNMB-213ENST00000492512 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
GPNMB-213ENST00000492512 SENP6Q9GZR1 1112 aaPredicted RBP16.86■□□□□ 0.29
GPNMB-213ENST00000492512 ZBTB21Q9ULJ3 1066 aa16.86■□□□□ 0.29
GPNMB-213ENST00000492512 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
GPNMB-213ENST00000492512 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
GPNMB-213ENST00000492512 MAP2K5Q13163 448 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 MFSD14CQ5VZR4 134 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 USP17L2Q6R6M4 530 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
GPNMB-213ENST00000492512 EDC3Q96F86 508 aaKnown RBP16.85■□□□□ 0.29
GPNMB-213ENST00000492512 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 GUCD1Q96NT3 240 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 FLT1P17948 1338 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 VCANP13611 3396 aa16.85■□□□□ 0.29
GPNMB-213ENST00000492512 CT47B1P0C2W7 299 aaPredicted RBP16.84■□□□□ 0.29
GPNMB-213ENST00000492512 PPP4CP60510 307 aa16.84■□□□□ 0.29
GPNMB-213ENST00000492512 CCNA1P78396 465 aa16.84■□□□□ 0.29
GPNMB-213ENST00000492512 WDR78Q5VTH9 848 aa16.84■□□□□ 0.29
GPNMB-213ENST00000492512 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
GPNMB-213ENST00000492512 PRKAG2Q9UGJ0 569 aa16.84■□□□□ 0.29
GPNMB-213ENST00000492512 RABGAP1Q9Y3P9 1069 aa16.84■□□□□ 0.29
GPNMB-213ENST00000492512 EYSQ5T1H1 3165 aa16.84■□□□□ 0.29
GPNMB-213ENST00000492512 MYO5AQ9Y4I1 1855 aaKnown RBP16.84■□□□□ 0.29
GPNMB-213ENST00000492512 HLA-DOAP06340 250 aa16.83■□□□□ 0.28
GPNMB-213ENST00000492512 CNGA1P29973 690 aa16.83■□□□□ 0.28
GPNMB-213ENST00000492512 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.28
GPNMB-213ENST00000492512 ZNF697Q5TEC3 545 aa16.83■□□□□ 0.28
GPNMB-213ENST00000492512 POTEEQ6S8J3 1075 aa16.83■□□□□ 0.28
GPNMB-213ENST00000492512 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
GPNMB-213ENST00000492512 SNRKQ9NRH2 765 aa16.83■□□□□ 0.28
GPNMB-213ENST00000492512 NDUFB9Q9Y6M9 179 aa16.83■□□□□ 0.28
GPNMB-213ENST00000492512 MYH1P12882 1939 aa16.82■□□□□ 0.28
GPNMB-213ENST00000492512 MSCO60682 206 aa16.82■□□□□ 0.28
GPNMB-213ENST00000492512 ATN1P54259 1190 aaPredicted RBP16.82■□□□□ 0.28
GPNMB-213ENST00000492512 ZYXQ15942 572 aaKnown RBP16.82■□□□□ 0.28
GPNMB-213ENST00000492512 TTC39AQ5SRH9 613 aa16.82■□□□□ 0.28
GPNMB-213ENST00000492512 FEZ1Q99689 392 aa16.82■□□□□ 0.28
GPNMB-213ENST00000492512 FLRT1Q9NZU1 646 aa16.82■□□□□ 0.28
GPNMB-213ENST00000492512 DDX20Q9UHI6 824 aaKnown RBP16.82■□□□□ 0.28
GPNMB-213ENST00000492512 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
GPNMB-213ENST00000492512 PRUNE2Q8WUY3 3088 aa16.82■□□□□ 0.28
GPNMB-213ENST00000492512 SLC15A5A6NIM6 579 aa16.81■□□□□ 0.28
GPNMB-213ENST00000492512 USP17L15C9J2P7 530 aa16.81■□□□□ 0.28
GPNMB-213ENST00000492512 USP17L13C9JLJ4 530 aa16.81■□□□□ 0.28
GPNMB-213ENST00000492512 USP17L11C9JVI0 530 aa16.81■□□□□ 0.28
GPNMB-213ENST00000492512 USP17L18D6R9N7 530 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms