RNA–Protein interactions for RNA: ENST00000492472.1

RBM5-223, Transcript of RNA binding motif protein 5, human

TSL 2

Gene RBM5, Length 902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-223	ENST00000492472	BTBD19	C9JJ37	291 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	INPP5B	P32019	993 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	BTD	P43251	543 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	RGS3	P49796	1198 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	PRMT2	P55345	433 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	SLC9C1	Q4G0N8	1177 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	CCDC158	Q5M9N0	1113 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	ANKRD23	Q86SG2	305 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	SPATA5	Q8NB90	893 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	PARK7	Q99497	189 aa	Known RBP	10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	ZNF112	Q9UJU3	913 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	KCNH4	Q9UQ05	1017 aa		10.47	□□□□□ -0.73
RBM5-223	ENST00000492472	CXCL11	O14625	94 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	IGSF3	O75054	1194 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	FECH	P22830	423 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	HOXD10	P28358	340 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	ARID4A	P29374	1257 aa	Predicted RBP	10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	MECOM	Q03112	1051 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	PICALM	Q13492	652 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	TTC39A	Q5SRH9	613 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	PRPF38B	Q5VTL8	546 aa	Known RBP	10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	DIEXF	Q68CQ4	756 aa	Known RBP	10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	FASTKD5	Q7L8L6	764 aa	Known RBP	10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	SCYL3	Q8IZE3	742 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	TMEM57	Q8N5G2	664 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	ARMC5	Q96C12	935 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	NBPF3	Q9H094	633 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	GPR108	Q9NPR9	543 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	RAI14	Q9P0K7	980 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	LRP2BP	Q9P2M1	347 aa		10.46	□□□□□ -0.73
RBM5-223	ENST00000492472	ATAD5	Q96QE3	1844 aa		10.46	□□□□□ -0.74
RBM5-223	ENST00000492472	PTPRF	P10586	1907 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	RFX7	Q2KHR2	1363 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	GPR75-ASB3	A0A0A6YYF3	556 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	PNMA6E	A0A0J9YXQ4	647 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	PDHX	O00330	501 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	CTNND1	O60716	968 aa	Known RBP	10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	BAG3	O95817	575 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	MS4A1	P11836	297 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	LACTB	P83111	547 aa	Predicted RBP	10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	TPRN	Q4KMQ1	711 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	ITPRIP	Q8IWB1	547 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	HMG20B	Q9P0W2	317 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	PNMA3	Q9UL41	463 aa		10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	KIAA0100	Q14667	2235 aa	Known RBP	10.45	□□□□□ -0.74
RBM5-223	ENST00000492472	MGAM	O43451	1857 aa		10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	COL2A1	P02458	1487 aa	Predicted RBP	10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	MKI67	P46013	3256 aa	Known RBP	10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	ATRNL1	Q5VV63	1379 aa		10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	SURF6	O75683	361 aa	Known RBP	10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	ZMYND10	O75800	440 aa		10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	ATP8B2	P98198	1209 aa		10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	NSUN4	Q96CB9	384 aa	Known RBP	10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	TBC1D2	Q9BYX2	928 aa		10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	FOCAD	Q5VW36	1801 aa		10.44	□□□□□ -0.74
RBM5-223	ENST00000492472	ZBED9	Q6R2W3	1325 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	PHIP	Q8WWQ0	1821 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	PHF20L1	A8MW92	1017 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	PTPRA	P18433	802 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	MCAM	P43121	646 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	MAP3K10	Q02779	954 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	SLC4A8	Q2Y0W8	1093 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	TNNI3K	Q59H18	835 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	NAA16	Q6N069	864 aa	Predicted RBP	10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	NUDT18	Q6ZVK8	323 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	CERS3	Q8IU89	383 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	ZFPM1	Q8IX07	1006 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	SSH3	Q8TE77	659 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	ZNF333	Q96JL9	665 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	TNN	Q9UQP3	1299 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	SLC45A1	Q9Y2W3	748 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	PTCH2	Q9Y6C5	1203 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	ZHX2	Q9Y6X8	837 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	FPGT-TNNI3K	V9GXZ4	949 aa		10.43	□□□□□ -0.74
RBM5-223	ENST00000492472	CDK5RAP2	Q96SN8	1893 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472		A0A0G2JLL6	359 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	DDTL	A6NHG4	134 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	FMNL1	O95466	1100 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	PSMC4	P43686	418 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	RHBDL3	P58872	404 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	C17orf99	Q6UX52	265 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	GADL1	Q6ZQY3	521 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	ERC1	Q8IUD2	1116 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	TEX11	Q8IYF3	940 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	TTC13	Q8NBP0	860 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	RAET1E	Q8TD07	263 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	TATDN2	Q93075	761 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	GCC1	Q96CN9	775 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	TRIM34	Q9BYJ4	488 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	DHX36	Q9H2U1	1008 aa	Known RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	DDX4	Q9NQI0	724 aa	Known RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	CPA4	Q9UI42	421 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	HERC5	Q9UII4	1024 aa	Known RBP	10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	ZSWIM8	A7E2V4	1837 aa		10.42	□□□□□ -0.74
RBM5-223	ENST00000492472	TRIM75P	A6NK02	468 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms