RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 ACTN4O43707 911 aaKnown RBP18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 NTSR2O95665 410 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 CRKLP46109 303 aaKnown RBP18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 HOMER1Q86YM7 354 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 REXO1L1PQ8IX06 675 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 MLKLQ8NB16 471 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 UBAC1Q9BSL1 405 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 ANAPC4Q9UJX5 808 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 MYH2Q9UKX2 1941 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 MYH14Q7Z406 1995 aaKnown RBP18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 SMIM22K7EJ46 135 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 CYP7A1P22680 504 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 USP49Q70CQ1 688 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 FCHSD1Q86WN1 690 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 GRAMD1CQ8IYS0 662 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 ENOX1Q8TC92 643 aaKnown RBP18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 SDR42E1Q8WUS8 393 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 MED15Q96RN5 788 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 A0A1B0GUL6 1792 aa18.47■□□□□ 0.55
SEMA4D-220ENST00000492386 TNKSO95271 1327 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 FANCGO15287 622 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 HSP90AA4PQ58FG1 418 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 SMARCE1Q969G3 411 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 RNF26Q9BY78 433 aaPredicted RBP18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 CABP5Q9NP86 173 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 DNAI1Q9UI46 699 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 NFE2L3Q9Y4A8 694 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 CACNA1SQ13698 1873 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 ERCC6LQ2NKX8 1250 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 TRIML1Q8N9V2 468 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 SPATA20Q8TB22 786 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 CSRNP2Q9H175 543 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 CEP131Q9UPN4 1083 aa18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 IQSEC3Q9UPP2 1182 aaPredicted RBP18.46■□□□□ 0.55
SEMA4D-220ENST00000492386 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 ZNF804BA4D1E1 1349 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 MINDY4BA8MYZ0 360 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 PDILTQ8N807 584 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 NOL10Q9BSC4 688 aaKnown RBP18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 FAM53CQ9NYF3 392 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 BAZ2AQ9UIF9 1905 aaKnown RBP18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 DUOX1Q9NRD9 1551 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 COL1A1P02452 1464 aaPredicted RBP18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 FAM205CA6NFA0 338 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 ARHGAP6O43182 974 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 ATP2B1P20020 1258 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 PKN1Q16512 942 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 TRMT44Q8IYL2 757 aaKnown RBP18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 ESR2Q92731 530 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 DACH1Q9UI36 760 aa18.45■□□□□ 0.54
SEMA4D-220ENST00000492386 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 H2AFXP16104 143 aaPredicted RBP18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 FUT2Q10981 343 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 PPP2R5BQ15173 497 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 KANK3Q6NY19 840 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 NIP7Q9Y221 180 aaKnown RBP eCLIP18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 DLEC1Q9Y238 1755 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 NPHP1O15259 732 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 ENAHQ8N8S7 591 aaPredicted RBP18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 ZNF446Q9NWS9 450 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 PPP2R2CQ9Y2T4 447 aa18.44■□□□□ 0.54
SEMA4D-220ENST00000492386 SPECC1LQ69YQ0 1117 aa18.43■□□□□ 0.54
SEMA4D-220ENST00000492386 TC2NQ8N9U0 490 aa18.43■□□□□ 0.54
SEMA4D-220ENST00000492386 PHF20Q9BVI0 1012 aa18.43■□□□□ 0.54
SEMA4D-220ENST00000492386 VPS54Q9P1Q0 977 aa18.43■□□□□ 0.54
SEMA4D-220ENST00000492386 ABCF2Q9UG63 623 aa18.43■□□□□ 0.54
SEMA4D-220ENST00000492386 COL22A1Q8NFW1 1626 aaPredicted RBP18.43■□□□□ 0.54
SEMA4D-220ENST00000492386 VWA3AA6NCI4 1184 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 ZSCAN12O43309 604 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 PLCD1P51178 756 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 ITPK1Q13572 414 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 EARS2Q5JPH6 523 aaKnown RBP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 ZSCAN10Q96SZ4 725 aaPredicted RBP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 BAG1Q99933 345 aaPredicted RBP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 SAMSN1Q9NSI8 373 aaKnown RBP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 AATFQ9NY61 560 aaKnown RBP eCLIP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 RAI14Q9P0K7 980 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 TAF1P21675 1872 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 A0A087X0B3 334 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 TRIM75PA6NK02 468 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 CDK11BP21127 795 aaKnown RBP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 GYG1P46976 350 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
SEMA4D-220ENST00000492386 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 PRPF3O43395 683 aaKnown RBP18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 ERCC5P28715 1186 aaPredicted RBP18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 CYP2D7A0A087X1C5 515 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 STX10O60499 249 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 SIK1P57059 783 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 AKAP17AQ02040 695 aaKnown RBP18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 GABPB1Q06547 395 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms