RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TPM3P06753 285 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 CCZ1BP86790 482 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 CCZ1P86791 482 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 SF3B3Q15393 1217 aaKnown RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 IFIT1BQ5T764 474 aaKnown RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 RASGRP2Q7LDG7 609 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 ESR2Q92731 530 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 NSUN4Q96CB9 384 aaKnown RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 SCN7AQ01118 1682 aa14.33□□□□□ -0.12
HMGN1-220ENST00000492280 UBE4AQ14139 1066 aa14.33□□□□□ -0.12
HMGN1-220ENST00000492280 SAFBQ15424 915 aaKnown RBP eCLIP14.33□□□□□ -0.12
HMGN1-220ENST00000492280 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.12
HMGN1-220ENST00000492280 ZSCAN10Q96SZ4 725 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-220ENST00000492280 CCNL1Q9UK58 526 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-220ENST00000492280 CAVIN2O95810 425 aa14.33□□□□□ -0.12
HMGN1-220ENST00000492280 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
HMGN1-220ENST00000492280 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.12
HMGN1-220ENST00000492280 TMEM232C9JQI7 657 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 COBLO75128 1261 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 ZPR1O75312 459 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 DEXIO95424 95 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 NFIXQ14938 502 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 KRI1Q8N9T8 703 aaKnown RBP14.32□□□□□ -0.12
HMGN1-220ENST00000492280 STAMQ92783 540 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 NLRP3Q96P20 1036 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 RNF41Q9H4P4 317 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-220ENST00000492280 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMGN1-220ENST00000492280 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-220ENST00000492280 PPP6R2O75170 966 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 CDC25BP30305 580 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 PKN1Q16512 942 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 ARMCX5Q6P1M9 558 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 KRBA2Q6ZNG9 492 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 ARHGEF1Q92888 912 aaKnown RBP14.32□□□□□ -0.12
HMGN1-220ENST00000492280 DYNLL2Q96FJ2 89 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 PRIMPOLQ96LW4 560 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 FBXO2Q9UK22 296 aaPredicted RBP14.32□□□□□ -0.12
HMGN1-220ENST00000492280 STK36Q9NRP7 1315 aa14.32□□□□□ -0.12
HMGN1-220ENST00000492280 LTBP4Q8N2S1 1624 aa14.31□□□□□ -0.12
HMGN1-220ENST00000492280 EPSTI1Q96J88 318 aa14.31□□□□□ -0.12
HMGN1-220ENST00000492280 CSRNP2Q9H175 543 aa14.31□□□□□ -0.12
HMGN1-220ENST00000492280 A0A087X0B3 334 aa14.31□□□□□ -0.12
HMGN1-220ENST00000492280 HIBADHP31937 336 aaKnown RBP14.31□□□□□ -0.12
HMGN1-220ENST00000492280 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-220ENST00000492280 FANCLQ9NW38 375 aa14.31□□□□□ -0.12
HMGN1-220ENST00000492280 FANCCQ00597 558 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 AKAP17AQ02040 695 aaKnown RBP14.3□□□□□ -0.12
HMGN1-220ENST00000492280 SLC44A5Q8NCS7 719 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 NARFQ9UHQ1 456 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 TNRC6CQ9HCJ0 1690 aaKnown RBP14.3□□□□□ -0.12
HMGN1-220ENST00000492280 CUTAO60888 179 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 AFMP43652 599 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 ZNF174Q15697 407 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 FBXO33Q7Z6M2 555 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 MCM9Q9NXL9 1143 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 BTAF1O14981 1849 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 SRCAPQ6ZRS2 3230 aa14.3□□□□□ -0.12
HMGN1-220ENST00000492280 FMR1Q06787 632 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■□□□□ 10.3
HMGN1-220ENST00000492280 TROAPQ12815 778 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 SMYD4Q8IYR2 804 aaPredicted RBP14.29□□□□□ -0.12
HMGN1-220ENST00000492280 DHX58Q96C10 678 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 TUBE1Q9UJT0 475 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 CFAP100Q494V2 611 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 CATIPQ7Z7H3 387 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 WASF1Q92558 559 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.122e-6■■■■□ 20.4
HMGN1-220ENST00000492280 CPVLQ9H3G5 476 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 USP21Q9UK80 565 aa14.29□□□□□ -0.12
HMGN1-220ENST00000492280 SERPINC1P01008 464 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 FUT2Q10981 343 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 IQCA1Q86XH1 822 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 DZIP1Q86YF9 867 aaKnown RBP14.28□□□□□ -0.12
HMGN1-220ENST00000492280 SRBD1Q8N5C6 995 aaKnown RBP14.28□□□□□ -0.12
HMGN1-220ENST00000492280 PDCL3Q9H2J4 239 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
HMGN1-220ENST00000492280 PTPREP23469 700 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 KLHL10Q6JEL2 608 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
HMGN1-220ENST00000492280 SAP30BPQ9UHR5 308 aaKnown RBP14.28□□□□□ -0.12
HMGN1-220ENST00000492280 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 CNTNAP4Q9C0A0 1308 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 CCDC196A0A1B0GTZ2 297 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 TSPY2A6NKD2 308 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 CDC25AP30304 524 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 TM4SF1P30408 202 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 STX17P56962 302 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 RBM6P78332 1123 aaKnown RBP14.28□□□□□ -0.12
HMGN1-220ENST00000492280 POSTNQ15063 836 aa14.28□□□□□ -0.12
HMGN1-220ENST00000492280 FOXP1Q9H334 677 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-220ENST00000492280 RPS6KA4O75676 772 aa14.27□□□□□ -0.12
HMGN1-220ENST00000492280 UBASH3AP57075 661 aa14.27□□□□□ -0.12
HMGN1-220ENST00000492280 MYL5Q02045 173 aa14.27□□□□□ -0.12
HMGN1-220ENST00000492280 RILPL1Q5EBL4 403 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms