RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 RABL6Q3YEC7 729 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 ALFQ53S48 1182 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 CCDC93Q567U6 631 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 ACBD5Q5T8D3 534 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 KANK3Q6NY19 840 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 KIAA1211Q6ZU35 1233 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SUGP1Q8IWZ8 645 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 PLPP7Q8NBV4 271 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 TTC8Q8TAM2 541 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 GPT2Q8TD30 523 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 XAGE3Q8WTP9 111 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 EAF2Q96CJ1 260 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 CRELD1Q96HD1 420 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 DCAF5Q96JK2 942 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 ZSCAN31Q96LW9 406 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 DMRTB1Q96MA1 342 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 CITED4Q96RK1 184 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 HINFPQ9BQA5 517 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 METTL22Q9BUU2 404 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 UPF3BQ9BZI7 483 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 MUC3BQ9H195 1237 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 BICC1Q9H694 974 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 ZSWIM6Q9HCJ5 1215 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 COPRSQ9NQ92 184 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SH2B1Q9NRF2 756 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 DIAPH3Q9NSV4 1193 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 FAM13BQ9NYF5 915 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 POLG2Q9UHN1 485 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 TAGLN3Q9UI15 199 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 CDV3Q9UKY7 258 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 LIMCH1Q9UPQ0 1083 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 PA2G4Q9UQ80 394 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 AKAP2Q9Y2D5 859 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 CHMP3Q9Y3E7 222 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 RABGAP1Q9Y3P9 1069 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 R3HCC1Q9Y3T6 440 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 PPP2R3BQ9Y5P8 575 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 MRVI1Q9Y6F6 885 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 SPATA31A3Q5VYP0 1347 aa4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 WDR33Q9C0J8 1336 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-206ENST00000492233 RFX7Q2KHR2 1363 aa4.4□□□□□ -1.7
ATPAF1-206ENST00000492233 RPAP1Q9BWH6 1393 aaPredicted RBP4.4□□□□□ -1.7
ATPAF1-206ENST00000492233 JCADQ9P266 1359 aa4.4□□□□□ -1.7
ATPAF1-206ENST00000492233 RGPD2P0DJD1 1756 aa4.4□□□□□ -1.7
ATPAF1-206ENST00000492233 COL18A1P39060 1754 aa4.4□□□□□ -1.7
ATPAF1-206ENST00000492233 SFI1A8K8P3 1242 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ALG1L2C9J202 215 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CFAP99D6REC4 459 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 POTEB2H3BUK9 544 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CYP27B1O15528 508 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CBFA2T2O43439 604 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 PTCD1O75127 700 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CTSHP09668 335 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 GNA15P30679 374 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 NASPP49321 788 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 AK2P54819 239 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CASP7P55210 303 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 GUCA2AQ02747 115 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 PTH1RQ03431 593 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 PTPN12Q05209 780 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 SLC39A6Q13433 755 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 RAB33AQ14088 237 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 NECTIN1Q15223 517 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 LONRF1Q17RB8 773 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 TSGA10IPQ3SY00 556 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CCDC92Q53HC0 331 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 HS1BP3Q53T59 392 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 C1QTNF12Q5T7M4 302 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 VPS53Q5VIR6 699 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ANO1Q5XXA6 986 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ALG1LQ6GMV1 187 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CAVIN1Q6NZI2 390 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 LRSAM1Q6UWE0 723 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CWC27Q6UX04 472 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 RUFY3Q7L099 469 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 COPS6Q7L5N1 327 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 AACSQ86V21 672 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 DDX42Q86XP3 938 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 MICALL2Q8IY33 904 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 SIX5Q8N196 739 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 HELQQ8TDG4 1101 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 HNRNPLLQ8WVV9 542 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 RSPH1Q8WYR4 309 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 SLC39A7Q92504 469 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 MAP4K1Q92918 833 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ERP27Q96DN0 273 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ZNF496Q96IT1 587 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 PDLIM2Q96JY6 352 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 FMNL2Q96PY5 1086 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 MYCBPQ99417 103 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 DNAJC7Q99615 494 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 FEZ1Q99689 392 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 MYD88Q99836 296 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 TMEM106CQ9BVX2 250 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 FAM126AQ9BYI3 521 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ALDH8A1Q9H2A2 487 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 CCDC87Q9NVE4 849 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 TMEM63CQ9P1W3 806 aa4.4□□□□□ -1.71
ATPAF1-206ENST00000492233 ASAP1Q9ULH1 1129 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms