RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 KIF1BPQ96EK5 621 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 ASCC2Q9H1I8 757 aaPredicted RBP10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 CHMP4BQ9H444 224 aaKnown RBP10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 AS3MTQ9HBK9 375 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 RCAN3Q9UKA8 241 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 GJD2Q9UKL4 321 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 PNMA3Q9UL41 463 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 COG6Q9Y2V7 657 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 NDUFB9Q9Y6M9 179 aa10.21□□□□□ -0.77
SMARCB1-207ENST00000491967 HMMRO75330 724 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 FLT3LGP49771 235 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 GABPAQ06546 454 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 PABPC4Q13310 644 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 SHROOM1Q2M3G4 852 aaPredicted RBP10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 SLC4A8Q2Y0W8 1093 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 POTEEQ6S8J3 1075 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 CLASRPQ8N2M8 674 aaKnown RBP10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 ANKRD13CQ8N6S4 541 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 MIGA1Q8NAN2 632 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 NKX2-3Q8TAU0 364 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 SMCR8Q8TEV9 937 aaPredicted RBP10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 C12orf42Q96LP6 360 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 IL1RAPL2Q9NP60 686 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 SERPINB13Q9UIV8 391 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 ZBTB21Q9ULJ3 1066 aa10.2□□□□□ -0.78
SMARCB1-207ENST00000491967 USP17L10C9JJH3 530 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 ADCY3O60266 1144 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 HLA-DOAP06340 250 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 CCL5P13501 91 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 PDE6AP16499 860 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 ATP5JP18859 108 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 MTMR2Q13614 643 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 GCC1Q96CN9 775 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 PAK6Q9NQU5 681 aaPredicted RBP10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 EMILIN3Q9NT22 766 aa10.19□□□□□ -0.78
SMARCB1-207ENST00000491967 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 TNPO2O14787 897 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 GUCY1A2P33402 732 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 SHMT1P34896 483 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 PLCD1P51178 756 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 SLC9C2Q5TAH2 1124 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 C20orf194Q5TEA3 1177 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 TTC6Q86TZ1 520 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 CRACR2BQ8N4Y2 399 aaPredicted RBP10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 COA7Q96BR5 231 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 P2RX7Q99572 595 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 TXNRD2Q9NNW7 524 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 RBPJLQ9UBG7 517 aa10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 SAP30BPQ9UHR5 308 aaKnown RBP10.18□□□□□ -0.78
SMARCB1-207ENST00000491967 MYH7P12883 1935 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 TRIOBPQ9H2D6 2365 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 ZNF532Q9HCE3 1301 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 GDF11O95390 407 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 SGPL1O95470 568 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 GH2P01242 217 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 IFIT2P09913 472 aaKnown RBP10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 USP5P45974 858 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 HERVK_113P62684 666 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 UBXN2AP68543 259 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 USP17L2Q6R6M4 530 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 LBX2Q6XYB7 198 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 USP6NLQ92738 828 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 HAUS7Q99871 368 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 KIAA1683Q9H0B3 1180 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 RNF208Q9H0X6 261 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 UNC93B1Q9H1C4 597 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 TMOD4Q9NZQ9 345 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 RLFQ13129 1914 aa10.17□□□□□ -0.78
SMARCB1-207ENST00000491967 GOLIM4O00461 696 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 ECM2O94769 699 aaPredicted RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 MYCP01106 439 aaPredicted RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 INHAP05111 366 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 ELNP15502 786 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 ADD2P35612 726 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 Q3C1V9 767 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 CERKLQ49MI3 558 aaPredicted RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 HABP4Q5JVS0 413 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 MAP3K21Q5TCX8 1036 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 GPRC5AQ8NFJ5 357 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 U2AF1L4Q8WU68 220 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 GTF3C2Q8WUA4 911 aaPredicted RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 CRNKL1Q9BZJ0 848 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 DCTPP1Q9H773 170 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 DCP1AQ9NPI6 582 aaPredicted RBP10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 NAV1Q8NEY1 1877 aa10.16□□□□□ -0.78
SMARCB1-207ENST00000491967 BAZ2AQ9UIF9 1905 aaKnown RBP10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 IGHA2P01877 340 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 USP14P54578 494 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 UBE3CQ15386 1083 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 ABCB5Q2M3G0 1257 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 CATSPERGQ6ZRH7 1159 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 EDC3Q96F86 508 aaKnown RBP10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 PAG1Q9NWQ8 432 aa10.15□□□□□ -0.78
SMARCB1-207ENST00000491967 RABGAP1Q9Y3P9 1069 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms